RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 ENO3P13929 434 aaPredicted RBP21.58■■□□□ 1.04
UPF3A-202ENST00000375299 PCSK6P29122 969 aa21.58■■□□□ 1.04
UPF3A-202ENST00000375299 TNFAIP2Q03169 654 aa21.58■■□□□ 1.04
UPF3A-202ENST00000375299 TMEM132DQ14C87 1099 aa21.58■■□□□ 1.04
UPF3A-202ENST00000375299 SEL1L3Q68CR1 1132 aa21.58■■□□□ 1.04
UPF3A-202ENST00000375299 FSTL4Q6MZW2 842 aa21.58■■□□□ 1.04
UPF3A-202ENST00000375299 PAOXQ6QHF9 649 aa21.58■■□□□ 1.04
UPF3A-202ENST00000375299 PPP1R36Q96LQ0 422 aa21.58■■□□□ 1.04
UPF3A-202ENST00000375299 AGAP3Q96P47 875 aa21.58■■□□□ 1.04
UPF3A-202ENST00000375299 NMRAL1Q9HBL8 299 aa21.58■■□□□ 1.04
UPF3A-202ENST00000375299 BCAS2O75934 225 aaPredicted RBP21.57■■□□□ 1.04
UPF3A-202ENST00000375299 MCF2P10911 925 aa21.57■■□□□ 1.04
UPF3A-202ENST00000375299 EPHA3P29320 983 aa21.57■■□□□ 1.04
UPF3A-202ENST00000375299 SLC5A2P31639 672 aa21.57■■□□□ 1.04
UPF3A-202ENST00000375299 HERC3Q15034 1050 aa21.57■■□□□ 1.04
UPF3A-202ENST00000375299 PDCD6IPQ8WUM4 868 aaKnown RBP21.57■■□□□ 1.04
UPF3A-202ENST00000375299 TRAPPC12Q8WVT3 735 aa21.57■■□□□ 1.04
UPF3A-202ENST00000375299 P2RY11Q96G91 374 aa21.57■■□□□ 1.04
UPF3A-202ENST00000375299 KLHL32Q96NJ5 620 aa21.57■■□□□ 1.04
UPF3A-202ENST00000375299 WDR41Q9HAD4 459 aa21.57■■□□□ 1.04
UPF3A-202ENST00000375299 OXSMQ9NWU1 459 aa21.57■■□□□ 1.04
UPF3A-202ENST00000375299 hCG_2014768A0A024R1R8 64 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 STAU1O95793 577 aaKnown RBP21.56■■□□□ 1.04
UPF3A-202ENST00000375299 AMHP03971 560 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 ADSLP30566 484 aaPredicted RBP21.56■■□□□ 1.04
UPF3A-202ENST00000375299 DPP6P42658 865 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 HK2P52789 917 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 SNX16P57768 344 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 RBP5P82980 135 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 SLC10A6Q3KNW5 377 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 FAM43BQ6ZT52 329 aaPredicted RBP21.56■■□□□ 1.04
UPF3A-202ENST00000375299 RNF148Q8N7C7 305 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 TMEM102Q8N9M5 508 aaPredicted RBP21.56■■□□□ 1.04
UPF3A-202ENST00000375299 CHST13Q8NET6 341 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 SLC7A14Q8TBB6 771 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 GAB3Q8WWW8 586 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 ZNF669Q96BR6 464 aaPredicted RBP21.56■■□□□ 1.04
UPF3A-202ENST00000375299 CAB39LQ9H9S4 337 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 FAM49BQ9NUQ9 324 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 PRMT7Q9NVM4 692 aaPredicted RBP21.56■■□□□ 1.04
UPF3A-202ENST00000375299 MID2Q9UJV3 735 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 CNOT11Q9UKZ1 510 aaKnown RBP21.56■■□□□ 1.04
UPF3A-202ENST00000375299 CEPT1Q9Y6K0 416 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 ARL4AP40617 200 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 RPL14P50914 215 aaKnown RBP21.56■■□□□ 1.04
UPF3A-202ENST00000375299 PPP2R5DQ14738 602 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 DLG2Q15700 870 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 LY6KQ17RY6 165 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 AMIGO2Q86SJ2 522 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 PYROXD2Q8N2H3 581 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 URGCPQ8TCY9 931 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 CLEC4CQ8WTT0 213 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 KLRG1Q96E93 195 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 PGLYRP2Q96PD5 576 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 LRRC40Q9H9A6 602 aa21.56■■□□□ 1.04
UPF3A-202ENST00000375299 TRMUO75648 421 aaKnown RBP21.55■■□□□ 1.04
UPF3A-202ENST00000375299 TRPA1O75762 1119 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 C2P06681 752 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 F7P08709 466 aaPredicted RBP21.55■■□□□ 1.04
UPF3A-202ENST00000375299 GLUD2P49448 558 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 CLCN3P51790 818 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 ACOT1Q86TX2 421 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.55■■□□□ 1.04
UPF3A-202ENST00000375299 NLRP7Q8WX94 980 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 CNKSR2Q8WXI2 1034 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 DRC3Q9H069 523 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 PRDM16Q9HAZ2 1276 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 SEPT10Q9P0V9 454 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 H3BSA7 217 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 NOP56O00567 594 aaKnown RBP21.55■■□□□ 1.04
UPF3A-202ENST00000375299 PEX10O60683 326 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 CDH2P19022 906 aaPredicted RBP21.55■■□□□ 1.04
UPF3A-202ENST00000375299 EDNRBP24530 442 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 ATXN3P54252 364 aaPredicted RBP21.55■■□□□ 1.04
UPF3A-202ENST00000375299 ART3Q13508 389 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 DCTN2Q13561 401 aaKnown RBP21.55■■□□□ 1.04
UPF3A-202ENST00000375299 RFTN1Q14699 578 aaPredicted RBP21.55■■□□□ 1.04
UPF3A-202ENST00000375299 NETO2Q8NC67 525 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 MAML3Q96JK9 1138 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 NUF2Q9BZD4 464 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 RHBDL2Q9NX52 303 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 DPP3Q9NY33 737 aa21.55■■□□□ 1.04
UPF3A-202ENST00000375299 ACOT8O14734 319 aa21.54■■□□□ 1.04
UPF3A-202ENST00000375299 GRID2O43424 1007 aa21.54■■□□□ 1.04
UPF3A-202ENST00000375299 TADA2AO75478 443 aa21.54■■□□□ 1.04
UPF3A-202ENST00000375299 PSMC3P17980 439 aa21.54■■□□□ 1.04
UPF3A-202ENST00000375299 SCNN1BP51168 640 aa21.54■■□□□ 1.04
UPF3A-202ENST00000375299 EMP3P54852 163 aa21.54■■□□□ 1.04
UPF3A-202ENST00000375299 IFRD2Q12894 506 aaPredicted RBP21.54■■□□□ 1.04
UPF3A-202ENST00000375299 SLC26A9Q7LBE3 791 aa21.54■■□□□ 1.04
UPF3A-202ENST00000375299 CHERPQ8IWX8 916 aaKnown RBP21.54■■□□□ 1.04
UPF3A-202ENST00000375299 ZNF567Q8N184 647 aa21.54■■□□□ 1.04
UPF3A-202ENST00000375299 OR52K1Q8NGK4 314 aa21.54■■□□□ 1.04
UPF3A-202ENST00000375299 ADAM32Q8TC27 787 aa21.54■■□□□ 1.04
UPF3A-202ENST00000375299 STON2Q8WXE9 905 aa21.54■■□□□ 1.04
UPF3A-202ENST00000375299 AGAP2Q99490 1192 aa21.54■■□□□ 1.04
UPF3A-202ENST00000375299 GPR20Q99678 358 aa21.54■■□□□ 1.04
UPF3A-202ENST00000375299 EFCAB1Q9HAE3 211 aa21.54■■□□□ 1.04
UPF3A-202ENST00000375299 IGSF9Q9P2J2 1179 aa21.54■■□□□ 1.04
UPF3A-202ENST00000375299 AK5Q9Y6K8 562 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms