RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 PRPSAP1Q14558 356 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TRMT10BQ6PF06 316 aaKnown RBP18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MARK2Q7KZI7 788 aaKnown RBP18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 UMODL1-AS1Q8N2C9 162 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ANKLE1Q8NAG6 615 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 DIS3LQ8TF46 1054 aaKnown RBP18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 OVCA2Q8WZ82 227 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 MTBPQ96DY7 904 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TGS1Q96RS0 853 aaKnown RBP18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CDK5RAP1Q96SZ6 601 aaKnown RBP18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 LRRC40Q9H9A6 602 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 RC3H2Q9HBD1 1191 aaKnown RBP18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TMEM39AQ9NV64 488 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TMEM248Q9NWD8 314 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SYBUQ9NX95 663 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ATP11BQ9Y2G3 1177 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 FAM169AQ9Y6X4 670 aa18.41■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ABHD14A-ACY1A0A1B0GW23 586 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ADAM12O43184 909 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CSH1P0DML2 217 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CSH2P0DML3 217 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CCNB1P14635 433 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 DNAJB2P25686 324 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CNTFP26441 200 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 NDST2P52849 883 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CRYMQ14894 314 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SPANXN3Q5MJ09 141 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 C10orf120Q5SQS8 335 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CASC4Q6P4E1 433 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ARHGAP36Q6ZRI8 547 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 CNTD1Q8N815 330 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 OR52K1Q8NGK4 314 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TOP1MTQ969P6 601 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ZNF689Q96CS4 500 aaPredicted RBP18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 APOPT1Q96IL0 206 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 TRIM56Q9BRZ2 755 aaKnown RBP18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 ZYG11BQ9C0D3 744 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 NDFIP2Q9NV92 336 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 SAMD15Q9P1V8 674 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 AFF4Q9UHB7 1163 aaKnown RBP18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 RRP15Q9Y3B9 282 aaKnown RBP18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 PLXNA4Q9HCM2 1894 aa18.4■□□□□ 0.54
HLA-DQB1-201ENST00000374943 OBSL1O75147 1896 aa18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 KRT38O76015 456 aa18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 OAS1P00973 400 aaKnown RBP18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 SOD2P04179 222 aa18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 TAC1P20366 129 aa18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ITIH4Q14624 930 aa18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 SLC1A5Q15758 541 aa18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 PDK4Q16654 411 aa18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 SNX30Q5VWJ9 437 aa18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 CCDC197Q8NCU1 140 aa18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 PDZD8Q8NEN9 1154 aa18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 SERAC1Q96JX3 654 aa18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 FCRL5Q96RD9 977 aa18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 NOL6Q9H6R4 1146 aaKnown RBP18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 MKS1Q9NXB0 559 aa18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 BFARQ9NZS9 450 aa18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 MPP6Q9NZW5 540 aa18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 PCDH10Q9P2E7 1040 aa18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 VANGL2Q9ULK5 521 aa18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 HBS1LQ9Y450 684 aaKnown RBP18.39■□□□□ 0.53
HLA-DQB1-201ENST00000374943 CARNS1A5YM72 827 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 TRIM49D1C9J1S8 452 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 TBX18O95935 607 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 POLBP06746 335 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 FOXN2P32314 431 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 OR1D2P34982 312 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 CCNFP41002 786 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 NPY2RP49146 381 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 NEK3P51956 506 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 CRADDP78560 199 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 NAPEPLDQ6IQ20 393 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 LINC00523Q86TU6 105 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 SLC39A11Q8N1S5 342 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 GIPC2Q8TF65 315 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 CDKL2Q92772 493 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 HERC2P3Q9BVR0 1158 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 AAR2Q9Y312 384 aaKnown RBP18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 SLC12A8A0AV02 714 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 DRGXA6NNA5 263 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 TLR5O60602 858 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ABLIM3O94929 683 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ALADP13716 330 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 PAPOLAP51003 745 aaKnown RBP18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ANO4Q32M45 955 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 HHATQ5VTY9 493 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 TPGS2Q68CL5 300 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 TIFABQ6ZNK6 161 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 MIB1Q86YT6 1006 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 TCP10LQ8TDR4 215 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 CABS1Q96KC9 395 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ZNF558Q96NG5 402 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 CLSTN3Q9BQT9 956 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 GLOD4Q9HC38 313 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 FGFR1OP2Q9NVK5 253 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 GRID1Q9ULK0 1009 aa18.38■□□□□ 0.53
HLA-DQB1-201ENST00000374943 MAGEB16A2A368 324 aa18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 SNX3O60493 162 aa18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 EFCAB14O75071 495 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms