RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 MMP13P45452 471 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 BCAT1P54687 386 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 CCNIQ14094 377 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 CNGA2Q16280 664 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 MCMDC2Q4G0Z9 681 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 C12orf60Q5U649 245 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 RNF220Q5VTB9 566 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 CACHD1Q5VU97 1274 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 RUSC1-AS1Q66K80 236 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 CTR9Q6PD62 1173 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 CCDC149Q6ZUS6 474 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 ERO1BQ86YB8 467 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 MYO1HQ8N1T3 1032 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 LRTOMTQ8WZ04 291 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 HMCESQ96FZ2 354 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 SNX18Q96RF0 628 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 CIPCQ9C0C6 399 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 LRRC27Q9C0I9 530 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 PRSS22Q9GZN4 317 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 NAPBQ9H115 298 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 VPS16Q9H269 839 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 TUBA8Q9NY65 449 aaPredicted RBP5.06□□□□□ -1.6
PMS1-202ENST00000374826 DNMT3BQ9UBC3 853 aaKnown RBP5.06□□□□□ -1.6
PMS1-202ENST00000374826 AFF4Q9UHB7 1163 aaKnown RBP5.06□□□□□ -1.6
PMS1-202ENST00000374826 ZNF112Q9UJU3 913 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 LRRC37A2A6NM11 1700 aa5.06□□□□□ -1.6
PMS1-202ENST00000374826 RAD50Q92878 1312 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 ZNF236Q9UL36 1845 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 CCL15-CCL14A0A0B4J2E2 113 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 LOC102723971A0A1B0GUV8 181 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 POC1B-GALNT4F8VUJ3 575 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 MPHOSPH10O00566 681 aaKnown RBP5.05□□□□□ -1.6
PMS1-202ENST00000374826 INSIG1O15503 277 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 PRDM1O75626 825 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 HSPD1P10809 573 aaKnown RBP5.05□□□□□ -1.6
PMS1-202ENST00000374826 AKR1B1P15121 316 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 ZKSCAN1P17029 563 aaPredicted RBP5.05□□□□□ -1.6
PMS1-202ENST00000374826 CHMLP26374 656 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 PRKAR1BP31321 381 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 GKP32189 559 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 MAP2K2P36507 400 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 RENBPP51606 427 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 POLGP54098 1239 aaPredicted RBP5.05□□□□□ -1.6
PMS1-202ENST00000374826 HAND2P61296 217 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 SUMO2P61956 95 aaKnown RBP5.05□□□□□ -1.6
PMS1-202ENST00000374826 RPS16P62249 146 aaKnown RBP5.05□□□□□ -1.6
PMS1-202ENST00000374826 GABPAQ06546 454 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 PPIL2Q13356 520 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 POLD3Q15054 466 aaPredicted RBP5.05□□□□□ -1.6
PMS1-202ENST00000374826 CCL15Q16663 113 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 CERKLQ49MI3 558 aaPredicted RBP5.05□□□□□ -1.6
PMS1-202ENST00000374826 RNASE12Q5GAN4 147 aaKnown RBP5.05□□□□□ -1.6
PMS1-202ENST00000374826 BMP2KLQ5H9B9 411 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 C3orf38Q5JPI3 329 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 FCRL6Q6DN72 434 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 TATDN1Q6P1N9 297 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 CATSPERGQ6ZRH7 1159 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 KRT73Q86Y46 540 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 FOXP4Q8IVH2 680 aaPredicted RBP5.05□□□□□ -1.6
PMS1-202ENST00000374826 GALNT4Q8N4A0 578 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 SIRT6Q8N6T7 355 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 FAM156AQ8NDB6 213 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 RITA1Q96K30 269 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 ASB2Q96Q27 587 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 NACAP1Q9BZK3 213 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 SWAP70Q9UH65 585 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 ZNF580Q9UK33 172 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 OGDHLQ9ULD0 1010 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 ALPK3Q96L96 1907 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 PDE4DIPQ5VU43 2346 aa5.05□□□□□ -1.6
PMS1-202ENST00000374826 ZMYM6O95789 1325 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 MYH9P35579 1960 aaKnown RBP5.04□□□□□ -1.6
PMS1-202ENST00000374826 SMIM35A0A1B0GVV1 85 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 GOLGA6CA6NDK9 693 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 GOLGA6BA6NDN3 693 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 VSTM5A8MXK1 200 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 KCNU1A8MYU2 1149 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 H3BNC9 293 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 H7C4K7 107 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 CES2O00748 559 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 TPP1O14773 563 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 ADAMTS3O15072 1205 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 CD3EAPO15446 510 aaKnown RBP5.04□□□□□ -1.6
PMS1-202ENST00000374826 RGS10O43665 173 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 PMPCBO75439 489 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 RASAL1O95294 804 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 ZBED1O96006 694 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 ASNSP08243 561 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 GOLGA6DP0CG33 693 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 SNHG28P0DPA3 235 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 MYCLP12524 364 aaPredicted RBP5.04□□□□□ -1.6
PMS1-202ENST00000374826 EPHA3P29320 983 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 HMGCS2P54868 508 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 MAP2K1Q02750 393 aaPredicted RBP5.04□□□□□ -1.6
PMS1-202ENST00000374826 PPATQ06203 517 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 SREBF2Q12772 1141 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 SPP2Q13103 211 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 DAZAP2Q15038 168 aaPredicted RBP5.04□□□□□ -1.6
PMS1-202ENST00000374826 ZNF260Q3ZCT1 412 aa5.04□□□□□ -1.6
PMS1-202ENST00000374826 SBK1Q52WX2 424 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 303.3 ms