RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 RGPD4Q7Z3J3 1758 aa17.69■□□□□ 0.42
LDLRAP1-201ENST00000374338 C2CD4BA6NLJ0 364 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 TRIM49D1C9J1S8 452 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 TRPA1O75762 1119 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 SMPD1P17405 629 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 GRIK4Q16099 956 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 PCDH19Q8TAB3 1148 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 ALKBH8Q96BT7 664 aaKnown RBP17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 MCRS1Q96EZ8 462 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 GPATCH1Q9BRR8 931 aaKnown RBP17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 SNRNP25Q9BV90 132 aaKnown RBP17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 NT5C1AQ9BXI3 368 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 TPK1Q9H3S4 243 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 ASNSD1Q9NWL6 643 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 IKBKGQ9Y6K9 419 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 APOC4-APOC2K7ER74 178 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 CLDN5O00501 218 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 DYNC1LI2O43237 492 aaPredicted RBP17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 PAPSS1O43252 624 aaPredicted RBP17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 APOC2P02655 101 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 OSBPP22059 807 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 HOXD11P31277 338 aaPredicted RBP17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 PPARGP37231 505 aaPredicted RBP17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 EIF2B2P49770 351 aaKnown RBP17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 ZNF143P52747 638 aaPredicted RBP17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 CREB5Q02930 508 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 PGM2L1Q6PCE3 622 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 POLNQ7Z5Q5 900 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 PLD5Q8N7P1 536 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 CMASQ8NFW8 434 aaPredicted RBP17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 ADAM32Q8TC27 787 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 APOPT1Q96IL0 206 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 CGREF1Q99674 301 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 TRNAU1APQ9NX07 287 aaKnown RBP17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 SHOC2Q9UQ13 582 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 EIF3FO00303 357 aaPredicted RBP17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 PDHXO00330 501 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 YBX3P16989 372 aaKnown RBP eCLIP17.68■□□□□ 0.424e-8■■□□□ 14.3
LDLRAP1-201ENST00000374338 S100A1P23297 94 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 BCAR1P56945 870 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 NUP107P57740 925 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 SLC10A2Q12908 348 aaPredicted RBP17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 ITPRIPL1Q6GPH6 555 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 TRMT10BQ6PF06 316 aaKnown RBP17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 CATSPER4Q7RTX7 472 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 FAM131BQ86XD5 332 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 SLC10A4Q96EP9 437 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 GBA3Q9H227 469 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 PADI4Q9UM07 663 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 POMPQ9Y244 141 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 GIT1Q9Y2X7 761 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 SPO11Q9Y5K1 396 aa17.68■□□□□ 0.42
LDLRAP1-201ENST00000374338 I3L4J1 428 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 COPEO14579 308 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 FOXD2O60548 495 aaPredicted RBP17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 IL18RAPO95256 599 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 SNAI1O95863 264 aaPredicted RBP17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 INHBAP08476 426 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 GRM1Q13255 1194 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 DCAF6Q58WW2 860 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 DRICH1Q6PGQ1 229 aaPredicted RBP17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 PQLC3Q8N755 202 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 WWP1Q9H0M0 922 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 CNTN3Q9P232 1028 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 METTL18O95568 372 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 VDRP11473 427 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 NEK2P51955 445 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 TAP1Q03518 808 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 CD300CQ08708 224 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 SOWAHAQ2M3V2 549 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 VWA5B1Q5TIE3 1220 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 METTL21CQ5VZV1 264 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 CES3Q6UWW8 571 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 FASTKD5Q7L8L6 764 aaKnown RBP17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 KBTBD6Q86V97 674 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 CENPSQ8N2Z9 138 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 RAB3IL1Q8TBN0 382 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 TMEM40Q8WWA1 233 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 STARD8Q92502 1023 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 FAM149B1Q96BN6 582 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 RANBP9Q96S59 729 aa17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 PAIP1Q9H074 479 aaKnown RBP17.67■□□□□ 0.42
LDLRAP1-201ENST00000374338 K7EPI3 171 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 STAMBPO95630 424 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 ZNF12P17014 697 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 PHBP35232 272 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 SLC5A3P53794 718 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 CAMK2BQ13554 666 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 TBCCQ15814 346 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 INAQ16352 499 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 CCDC185Q8N715 623 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 KHSRPQ92945 711 aaKnown RBP eCLIP17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 DRC3Q9H069 523 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 KLC2Q9H0B6 622 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 SEPT10Q9P0V9 454 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 CCDC162PA2VCL2 907 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 SOBPA7XYQ1 873 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 ZNF23P17027 643 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 HOXA11P31270 313 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms