RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 CDKAL1Q5VV42 579 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 AGMOQ6ZNB7 445 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 DLG3Q92796 817 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 GSTK1Q9Y2Q3 226 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 TIMM13Q9Y5L4 95 aaPredicted RBP11.73□□□□□ -0.53
VCL-202ENST00000372755 UMODL1Q5DID0 1318 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 ANKDD1BA6NHY2 528 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 ERN1O75460 977 aaKnown RBP11.73□□□□□ -0.53
VCL-202ENST00000372755 YBX3P16989 372 aaKnown RBP eCLIP11.73□□□□□ -0.532e-7■■□□□ 12.9
VCL-202ENST00000372755 MMP13P45452 471 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 MAPKAPK2P49137 400 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 ATN1P54259 1190 aaPredicted RBP11.73□□□□□ -0.53
VCL-202ENST00000372755 MFSD10Q14728 455 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 NEK5Q6P3R8 708 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 ZPBP2Q6X784 338 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 NIPA1Q7RTP0 329 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 ZNF671Q8TAW3 534 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 APBA2Q99767 749 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 CEP41Q9BYV8 373 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 POLR1EQ9GZS1 481 aaKnown RBP11.73□□□□□ -0.53
VCL-202ENST00000372755 SPATC1LQ9H0A9 340 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 MYLK2Q9H1R3 596 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 POPDC2Q9HBU9 364 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 NINJ2Q9NZG7 142 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 TSPOAP1O95153 1857 aa11.73□□□□□ -0.53
VCL-202ENST00000372755 ALOX12P18054 663 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 CXCR2P25025 360 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 TLX1P31314 330 aaPredicted RBP11.72□□□□□ -0.53
VCL-202ENST00000372755 BTG3Q14201 252 aaPredicted RBP11.72□□□□□ -0.53
VCL-202ENST00000372755 ZNHIT3Q15649 155 aaPredicted RBP11.72□□□□□ -0.53
VCL-202ENST00000372755 ZSWIM7Q19AV6 140 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 IL27RAQ6UWB1 636 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 ADHFE1Q8IWW8 467 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 DEFB106AQ8N104 65 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 TMEM86AQ8N2M4 240 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 DNAJB3Q8WWF6 145 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 CATSPERZQ9NTU4 200 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 CCNA2P20248 432 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 ACAT1P24752 427 aaKnown RBP11.72□□□□□ -0.53
VCL-202ENST00000372755 PSMD4P55036 377 aaKnown RBP11.72□□□□□ -0.53
VCL-202ENST00000372755 NEDD8Q15843 81 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 SCAIQ8N9R8 606 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 REPS2Q8NFH8 660 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 DPF3Q92784 378 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 SLC5A5Q92911 643 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 CPA4Q9UI42 421 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 IQGAP3Q86VI3 1631 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 HIST1H2ABP04908 130 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 HNMTP50135 292 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 CDK16Q00536 496 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 TRIM32Q13049 653 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 ATP1A4Q13733 1029 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 SPDYCQ5MJ68 293 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 DOK6Q6PKX4 331 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 C3orf67Q6ZVT6 689 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 HIST3H2AQ7L7L0 130 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 SNX32Q86XE0 403 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 HIST1H2ACQ93077 130 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 OMA1Q96E52 524 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 RIOX1Q9H6W3 641 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 HMG20AQ9NP66 347 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 SAR1AQ9NR31 198 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 ARL15Q9NXU5 204 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 DDX20Q9UHI6 824 aaKnown RBP11.72□□□□□ -0.53
VCL-202ENST00000372755 NFASCO94856 1347 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 A0A087WXM4 84 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 FGF10O15520 208 aaPredicted RBP11.72□□□□□ -0.53
VCL-202ENST00000372755 SGTAO43765 313 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 MGRN1O60291 552 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 RECQL5O94762 991 aaPredicted RBP11.72□□□□□ -0.53
VCL-202ENST00000372755 CATP04040 527 aaKnown RBP11.72□□□□□ -0.53
VCL-202ENST00000372755 GLI1P08151 1106 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 VIL1P09327 827 aaKnown RBP11.72□□□□□ -0.53
VCL-202ENST00000372755 PECAM1P16284 738 aaPredicted RBP11.72□□□□□ -0.53
VCL-202ENST00000372755 EPHX2P34913 555 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 CCR4P51679 360 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 OAZ1P54368 228 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 RRP1BQ14684 758 aaKnown RBP11.72□□□□□ -0.53
VCL-202ENST00000372755 CLVS1Q8IUQ0 354 aaPredicted RBP11.72□□□□□ -0.53
VCL-202ENST00000372755 MPP4Q96JB8 637 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 TEKT5Q96M29 485 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 PTPRUQ92729 1446 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 ZCCHC11Q5TAX3 1644 aaKnown RBP11.72□□□□□ -0.53
VCL-202ENST00000372755 CDC42P60953 191 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 SLC15A2Q16348 729 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 PARP6Q2NL67 630 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 TCEAL5Q5H9L2 206 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 FAM220AQ7Z4H9 259 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 ZFP28Q8NHY6 868 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 SPACA7Q96KW9 195 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 COQ7Q99807 217 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 OXCT2Q9BYC2 517 aaPredicted RBP11.72□□□□□ -0.53
VCL-202ENST00000372755 PSME2Q9UL46 239 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 LRCH1Q9Y2L9 728 aa11.72□□□□□ -0.53
VCL-202ENST00000372755 ACKR2O00590 384 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 H2AFXP16104 143 aaPredicted RBP11.71□□□□□ -0.53
VCL-202ENST00000372755 RPL14P50914 215 aaKnown RBP11.71□□□□□ -0.53
VCL-202ENST00000372755 TCEA2Q15560 299 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 ALG11Q2TAA5 492 aa11.71□□□□□ -0.53
VCL-202ENST00000372755 ZNF276Q8N554 614 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms