RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 CDH4P55283 916 aa26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 BBS9Q3SYG4 887 aa26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 LEMD2Q8NC56 503 aa26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 ZSCAN18Q8TBC5 510 aaPredicted RBP26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 PYROXD1Q8WU10 500 aa26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 AGAP3Q96P47 875 aa26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 XAB2Q9HCS7 855 aaKnown RBP26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 RSPH14Q9UHP6 348 aa26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 MSRAQ9UJ68 235 aa26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 ZBTB24O43167 697 aaPredicted RBP26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 RRP9O43818 475 aaKnown RBP26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 RNF40O75150 1001 aa26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 SHBGP04278 402 aa26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 ABHD2P08910 425 aa26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 PBX2P40425 430 aa26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 POLD3Q15054 466 aaPredicted RBP26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 MSS51Q4VC12 460 aa26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 CIR1Q86X95 450 aaPredicted RBP26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 MYEOVQ96EZ4 313 aa26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 TMEM109Q9BVC6 243 aa26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 GBA3Q9H227 469 aa26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 LSM7Q9UK45 103 aaKnown RBP26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 ZFP37Q9Y6Q3 630 aaPredicted RBP26.9■■□□□ 1.9
ATPAF1-202ENST00000371937 CLDN11O75508 207 aa26.89■■□□□ 1.9
ATPAF1-202ENST00000371937 DDX6P26196 483 aaKnown RBP eCLIP26.89■■□□□ 1.9
ATPAF1-202ENST00000371937 FASTKD3Q14CZ7 662 aaKnown RBP26.89■■□□□ 1.9
ATPAF1-202ENST00000371937 UBAP2Q5T6F2 1119 aaKnown RBP26.89■■□□□ 1.9
ATPAF1-202ENST00000371937 TTC39BQ5VTQ0 682 aaPredicted RBP26.89■■□□□ 1.9
ATPAF1-202ENST00000371937 CFAP52Q8N1V2 620 aa26.89■■□□□ 1.9
ATPAF1-202ENST00000371937 HMCESQ96FZ2 354 aa26.89■■□□□ 1.9
ATPAF1-202ENST00000371937 IL12RB2Q99665 862 aa26.89■■□□□ 1.9
ATPAF1-202ENST00000371937 PBX4Q9BYU1 374 aa26.89■■□□□ 1.9
ATPAF1-202ENST00000371937 ZDHHC7Q9NXF8 308 aa26.89■■□□□ 1.9
ATPAF1-202ENST00000371937 RAB30Q15771 203 aa26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 KRT71Q3SY84 523 aa26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 DNAJC21Q5F1R6 531 aaKnown RBP26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 PDCD7Q8N8D1 485 aaKnown RBP26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 UHMK1Q8TAS1 419 aaKnown RBP26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 WBP2Q969T9 261 aa26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 CCDC77Q9BR77 488 aa26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 ROPN1BQ9BZX4 212 aaPredicted RBP26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 LMAN2LQ9H0V9 348 aa26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 ROPN1Q9HAT0 212 aaPredicted RBP26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 TMBIM4Q9HC24 238 aa26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 HCFC1R1Q9NWW0 138 aa26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 ZNF510Q9Y2H8 683 aa26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 SHROOM3Q8TF72 1996 aa26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 DENND4CQ5VZ89 1909 aa26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 CEP290O15078 2479 aa26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 ERI2A8K979 691 aaKnown RBP26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 CCDC38Q502W7 563 aa26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 HP1BP3Q5SSJ5 553 aaPredicted RBP26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 CHST9Q7L1S5 443 aa26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 CAND1Q86VP6 1230 aaKnown RBP26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 ADAMTS19Q8TE59 1207 aa26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 LRRC39Q96DD0 335 aa26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 LRRC4CQ9HCJ2 640 aa26.88■■□□□ 1.89
ATPAF1-202ENST00000371937 PER2O15055 1255 aa26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 MLNP12872 115 aa26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 TSHRP16473 764 aa26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 CD68P34810 354 aaPredicted RBP26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 HNRNPDQ14103 355 aaKnown RBP26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 PRPSAP1Q14558 356 aa26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 COL13A1Q5TAT6 717 aaPredicted RBP26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 Q6ZNB5 142 aa26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 ANKMY2Q8IV38 441 aa26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 ATP11CQ8NB49 1132 aa26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 FBXO36Q8NEA4 188 aa26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 MAML1Q92585 1016 aa26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 PRICKLE1Q96MT3 831 aaPredicted RBP26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 DNMT3BQ9UBC3 853 aaKnown RBP26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 HCFC2Q9Y5Z7 792 aa26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 MYO18AQ92614 2054 aaKnown RBP26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 CHD9Q3L8U1 2897 aa26.87■■□□□ 1.89
ATPAF1-202ENST00000371937 A0A087WUV0 522 aaPredicted RBP26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 A0A1B0GVM2 712 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 GOLGA6CA6NDK9 693 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 TCAF2A6NFQ2 919 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 SOBPA7XYQ1 873 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 GREM1O60565 184 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 BANF1O75531 89 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 NEBLO76041 1014 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 POU2F2P09086 479 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 GOLGA6DP0CG33 693 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 GJA1P17302 382 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 RENBPP51606 427 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 RPS24P62847 133 aaKnown RBP26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 ARHGAP15Q53QZ3 475 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 C6orf118Q5T5N4 469 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 ZNF354CQ86Y25 554 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 PALM2Q8IXS6 379 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 SHKBP1Q8TBC3 707 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 NSMCE1Q8WV22 266 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 ARL8AQ96BM9 186 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 PPP1R2P1Q96PQ5 205 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 GDF15Q99988 308 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 SLC46A2Q9BY10 475 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 MAGEH1Q9H213 219 aa26.86■■□□□ 1.89
ATPAF1-202ENST00000371937 CERS4Q9HA82 394 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms