RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 DENND6AQ8IWF6 608 aa12□□□□□ -0.49
PDE6C-201ENST00000371447 THEM5Q8N1Q8 247 aa12□□□□□ -0.49
PDE6C-201ENST00000371447 SERBP1Q8NC51 408 aaKnown RBP eCLIP12□□□□□ -0.49
PDE6C-201ENST00000371447 CCDC124Q96CT7 223 aaKnown RBP12□□□□□ -0.49
PDE6C-201ENST00000371447 SNX15Q9NRS6 342 aa12□□□□□ -0.49
PDE6C-201ENST00000371447 RBM22Q9NW64 420 aaKnown RBP eCLIP12□□□□□ -0.49
PDE6C-201ENST00000371447 SLC2A6Q9UGQ3 507 aa12□□□□□ -0.49
PDE6C-201ENST00000371447 TRPA1O75762 1119 aa12□□□□□ -0.49
PDE6C-201ENST00000371447 PIRTP0C851 137 aa12□□□□□ -0.49
PDE6C-201ENST00000371447 GARSP41250 739 aaKnown RBP12□□□□□ -0.49
PDE6C-201ENST00000371447 NAA25Q14CX7 972 aa12□□□□□ -0.49
PDE6C-201ENST00000371447 FSTL4Q6MZW2 842 aa12□□□□□ -0.49
PDE6C-201ENST00000371447 CNTD1Q8N815 330 aa12□□□□□ -0.49
PDE6C-201ENST00000371447 SMC1BQ8NDV3 1235 aa12□□□□□ -0.49
PDE6C-201ENST00000371447 PPP4R1Q8TF05 950 aa12□□□□□ -0.49
PDE6C-201ENST00000371447 RSPH1Q8WYR4 309 aa12□□□□□ -0.49
PDE6C-201ENST00000371447 BHMTQ93088 406 aa12□□□□□ -0.49
PDE6C-201ENST00000371447 RAB3IPQ96QF0 476 aaPredicted RBP12□□□□□ -0.49
PDE6C-201ENST00000371447 FSD1LQ9BXM9 530 aa12□□□□□ -0.49
PDE6C-201ENST00000371447 DENND2DQ9H6A0 471 aaPredicted RBP12□□□□□ -0.49
PDE6C-201ENST00000371447 MOCS1Q9NZB8 636 aa12□□□□□ -0.49
PDE6C-201ENST00000371447 PRR5-ARHGAP8B1AHC4 643 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 TADA2AO75478 443 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 FBXO21O94952 628 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 BPGMP07738 259 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 CYBAP13498 195 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 CCNB1P14635 433 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 ARHGAP8P85298 464 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 CDK16Q00536 496 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 PCBP1Q15365 356 aaKnown RBP eCLIP11.99□□□□□ -0.49
PDE6C-201ENST00000371447 ANKRD20A4Q4UJ75 823 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 CFAP157Q5JU67 520 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 KCNMB4Q86W47 210 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 TREML1Q86YW5 311 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 KCTD13Q8WZ19 329 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 N4BP2L2Q92802 583 aaPredicted RBP11.99□□□□□ -0.49
PDE6C-201ENST00000371447 FAM161BQ96MY7 647 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 THTPAQ9BU02 230 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 BRD8Q9H0E9 1235 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 A0A096LPK6 155 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 HACD1B0YJ81 288 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 SEPT4O43236 478 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 GJB3O75712 270 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 ATXN3P54252 364 aaPredicted RBP11.99□□□□□ -0.49
PDE6C-201ENST00000371447 MPP1Q00013 466 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 MGAT5BQ3V5L5 792 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 TEX44Q53QW1 395 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 GLB1LQ6UWU2 654 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 TMEM86AQ8N2M4 240 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 CCNYL1Q8N7R7 359 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 SHKBP1Q8TBC3 707 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 GIPC2Q8TF65 315 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 LRRC39Q96DD0 335 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 NSL1Q96IY1 281 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 FRMD8Q9BZ67 464 aaPredicted RBP11.99□□□□□ -0.49
PDE6C-201ENST00000371447 SLC39A8Q9C0K1 460 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 TASP1Q9H6P5 420 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 GIT1Q9Y2X7 761 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 SHROOM3Q8TF72 1996 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 HHLA1C9JL84 531 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 E9PBE3 544 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 KLHL41O60662 606 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 CPB1P15086 417 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 MAP2K2P36507 400 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 SLC1A6P48664 564 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 EPHB1P54762 984 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 TUSC3Q13454 348 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 USP10Q14694 798 aaKnown RBP11.99□□□□□ -0.49
PDE6C-201ENST00000371447 KPNB1Q14974 876 aaKnown RBP11.99□□□□□ -0.49
PDE6C-201ENST00000371447 CNGA3Q16281 694 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 PSMD5Q16401 504 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 ZNF419Q96HQ0 510 aaPredicted RBP11.99□□□□□ -0.49
PDE6C-201ENST00000371447 NDNQ99608 321 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 CADM1Q9BY67 442 aaKnown RBP11.99□□□□□ -0.49
PDE6C-201ENST00000371447 LRRC40Q9H9A6 602 aa11.99□□□□□ -0.49
PDE6C-201ENST00000371447 A0A0U1RQF3 1178 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 TK2O00142 265 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 DHRS4L1P0CG22 281 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 SLC8A1P32418 973 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 MAGEA3P43357 314 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 RASSF2P50749 326 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 USP46P62068 366 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 MPP3Q13368 585 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 FAM171A1Q5VUB5 890 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 ESRP1Q6NXG1 681 aaKnown RBP11.98□□□□□ -0.49
PDE6C-201ENST00000371447 FAM117BQ6P1L5 589 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 ABI1Q8IZP0 508 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 CFAP52Q8N1V2 620 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 NT5C3BQ969T7 300 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 GORASP1Q9BQQ3 440 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 CYLDQ9NQC7 956 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 OSER1Q9NX31 292 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 FETUBQ9UGM5 382 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 ZNF638Q14966 1978 aaKnown RBP11.98□□□□□ -0.49
PDE6C-201ENST00000371447 PRKCGP05129 697 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 MX2P20592 715 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 GP5P40197 560 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 GLUD2P49448 558 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 SLC18A1P54219 525 aa11.98□□□□□ -0.49
PDE6C-201ENST00000371447 PAFAH1B3Q15102 231 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms