RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 HOXD12P35452 270 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 DPP6P42658 865 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 NOVA1P51513 510 aaKnown RBP15.42■□□□□ 0.06
LMO4-201ENST00000370542 FYB2Q5VWT5 728 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 EGFLAMQ63HQ2 1017 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 KCTD16Q68DU8 428 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 TPGS1Q6ZTW0 290 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 RRAGAQ7L523 313 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 LPCAT2Q7L5N7 544 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 CYP2U1Q7Z449 544 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 APLFQ8IW19 511 aaPredicted RBP15.42■□□□□ 0.06
LMO4-201ENST00000370542 SCML4Q8N228 414 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 ARHGAP18Q8N392 663 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 CPXM2Q8N436 756 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 CCDC197Q8NCU1 140 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 BAP1Q92560 729 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 SPACA7Q96KW9 195 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 CEP63Q96MT8 703 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 ACOX2Q99424 681 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 PLCD4Q9BRC7 762 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 DCLK3Q9C098 648 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 C4orf47A7E2U8 309 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 CYSRT1A8MQ03 144 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 PATE3B3GLJ2 98 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 XPO1O14980 1071 aaKnown RBP15.41■□□□□ 0.06
LMO4-201ENST00000370542 C7P10643 843 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 HOXB2P14652 356 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 CHKAP35790 457 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 PTGER3P43115 390 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 DGKGP49619 791 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 CLNS1AP54105 237 aaKnown RBP15.41■□□□□ 0.06
LMO4-201ENST00000370542 IRX4P78413 519 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 ZNF252P-AS1Q0IIN9 211 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 CUL2Q13617 745 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 RPS6KA1Q15418 735 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 PKDCCQ504Y2 493 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 TTC19Q6DKK2 380 aaPredicted RBP15.41■□□□□ 0.06
LMO4-201ENST00000370542 SLC23A3Q6PIS1 610 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 CPLX4Q7Z7G2 160 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 SYT12Q8IV01 421 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 SYCE1Q8N0S2 351 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 RBBP8NLQ8NC74 664 aaPredicted RBP15.41■□□□□ 0.06
LMO4-201ENST00000370542 HMGB4Q8WW32 186 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 KRT12Q99456 494 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 CENPHQ9H3R5 247 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 TMEM74BQ9NUR3 256 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 PILRBQ9UKJ0 227 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 KIAA1257Q9ULG3 409 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 PCNX2A6NKB5 2137 aa15.41■□□□□ 0.06
LMO4-201ENST00000370542 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 LRRC53A6NM62 1247 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 LIN7AO14910 233 aaPredicted RBP15.4■□□□□ 0.06
LMO4-201ENST00000370542 NPC1O15118 1278 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 SART1O43290 800 aaKnown RBP15.4■□□□□ 0.06
LMO4-201ENST00000370542 CSRP1P21291 193 aaKnown RBP15.4■□□□□ 0.06
LMO4-201ENST00000370542 CTNNA1P35221 906 aaKnown RBP15.4■□□□□ 0.06
LMO4-201ENST00000370542 SCTRP47872 440 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 DHPSP49366 369 aaPredicted RBP15.4■□□□□ 0.06
LMO4-201ENST00000370542 ZNF132P52740 706 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 HLTFQ14527 1009 aaKnown RBP eCLIP15.4■□□□□ 0.06
LMO4-201ENST00000370542 TRIP4Q15650 581 aaPredicted RBP15.4■□□□□ 0.06
LMO4-201ENST00000370542 SLC18A3Q16572 532 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 ODF2Q5BJF6 829 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 KIAA1211LQ6NV74 962 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 TLDC1Q6P9B6 456 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 SLC36A4Q6YBV0 504 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 METTL3Q86U44 580 aaKnown RBP15.4■□□□□ 0.06
LMO4-201ENST00000370542 TMEFF1Q8IYR6 380 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 KCTD13Q8WZ19 329 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 PIGKQ92643 395 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 PIWIL1Q96J94 861 aaKnown RBP15.4■□□□□ 0.06
LMO4-201ENST00000370542 TMEM9BQ9NQ34 198 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 BCCIPQ9P287 314 aaKnown RBP eCLIP15.4■□□□□ 0.06
LMO4-201ENST00000370542 ARMCX3Q9UH62 379 aaPredicted RBP15.4■□□□□ 0.06
LMO4-201ENST00000370542 STOML2Q9UJZ1 356 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 TSPAN16Q9UKR8 245 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 AGO1Q9UL18 857 aaKnown RBP15.4■□□□□ 0.06
LMO4-201ENST00000370542 INTUQ9ULD6 942 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 TFR2Q9UP52 801 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 GPSM3Q9Y4H4 160 aa15.4■□□□□ 0.06
LMO4-201ENST00000370542 CACNA1EQ15878 2313 aa15.39■□□□□ 0.05
LMO4-201ENST00000370542 CEP192Q8TEP8 1941 aa15.39■□□□□ 0.05
LMO4-201ENST00000370542 IGHV1OR15-9A0A0B4J2B8 117 aa15.39■□□□□ 0.05
LMO4-201ENST00000370542 CCT8L1PA6NM43 557 aa15.39■□□□□ 0.05
LMO4-201ENST00000370542 PGRMC1O00264 195 aaKnown RBP15.39■□□□□ 0.05
LMO4-201ENST00000370542 ZNF217O75362 1048 aa15.39■□□□□ 0.05
LMO4-201ENST00000370542 GFPT2O94808 682 aa15.39■□□□□ 0.05
LMO4-201ENST00000370542 ZBED1O96006 694 aa15.39■□□□□ 0.05
LMO4-201ENST00000370542 VDRP11473 427 aa15.39■□□□□ 0.05
LMO4-201ENST00000370542 NDUFV2P19404 249 aa15.39■□□□□ 0.05
LMO4-201ENST00000370542 HSD17B3P37058 310 aa15.39■□□□□ 0.05
LMO4-201ENST00000370542 TKTL1P51854 596 aa15.39■□□□□ 0.05
LMO4-201ENST00000370542 BCAT1P54687 386 aa15.39■□□□□ 0.05
LMO4-201ENST00000370542 MFAP3P55082 362 aa15.39■□□□□ 0.05
LMO4-201ENST00000370542 YWHAGP61981 247 aaKnown RBP eCLIP15.39■□□□□ 0.05
LMO4-201ENST00000370542 EFEMP1Q12805 493 aa15.39■□□□□ 0.05
LMO4-201ENST00000370542 TDRD12Q587J7 1177 aaKnown RBP15.39■□□□□ 0.05
LMO4-201ENST00000370542 DAB2IPQ5VWQ8 1189 aa15.39■□□□□ 0.05
LMO4-201ENST00000370542 PDZD3Q86UT5 571 aa15.39■□□□□ 0.05
LMO4-201ENST00000370542 CHPFQ8IZ52 775 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms