RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 MSCO60682 206 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 PEX10O60683 326 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 TSC22D2O75157 780 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 CABYRO75952 493 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 PEX5P50542 639 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 ZNF268Q14587 947 aaPredicted RBP8.69□□□□□ -1.02
ABCA4-201ENST00000370225 CCNG2Q16589 344 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 SPANXN3Q5MJ09 141 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 MFSD7Q6UXD7 560 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 RASAL3Q86YV0 1011 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 SCUBE1Q8IWY4 988 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 FBXO25Q8TCJ0 367 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 NDNQ99608 321 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 PORCNQ9H237 461 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 LRRC4BQ9NT99 713 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 DUSP12Q9UNI6 340 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 TNFSF13BQ9Y275 285 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 OPLAHO14841 1288 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 ZSCAN5DPP0CG00 497 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 HPCAL1P37235 193 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 NPY2RP49146 381 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 SERPINH1P50454 418 aaKnown RBP8.69□□□□□ -1.02
ABCA4-201ENST00000370225 DDI2Q5TDH0 399 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 CRTC3Q6UUV7 619 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 TMEM26Q6ZUK4 368 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 CYP4Z2PQ8N1L4 340 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 TMEM86AQ8N2M4 240 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 C12orf29Q8N999 325 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 C3orf20Q8ND61 904 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 FBXO6Q9NRD1 293 aaPredicted RBP8.69□□□□□ -1.02
ABCA4-201ENST00000370225 OPTCQ9UBM4 332 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 GULP1Q9UBP9 304 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 MAGEB16A2A368 324 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 TK2O00142 265 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 B4GALT5O43286 388 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 OR10H2O60403 315 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 FAM20BO75063 409 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 ADH1AP07327 375 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 COX7A2P14406 83 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 GLRA2P23416 452 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 SOX6P35712 828 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 CRATP43155 626 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 PSMD5Q16401 504 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 ZSCAN18Q8TBC5 510 aaPredicted RBP8.69□□□□□ -1.02
ABCA4-201ENST00000370225 REPS1Q96D71 796 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 RNPEPQ9H4A4 650 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 ALG9Q9H6U8 611 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 MRGBPQ9NV56 204 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 COMMD8Q9NX08 183 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 PLK2Q9NYY3 685 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 TUBGCP4Q9UGJ1 667 aa8.69□□□□□ -1.02
ABCA4-201ENST00000370225 SALL1Q9NSC2 1324 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 TBC1D3DA0A087WVF3 549 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 TBC1D3IA0A087WXS9 549 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 TBC1D3EA0A087X179 549 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 TBC1D3KA0A087X1G2 549 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 TBC1D3FA6NER0 549 aaPredicted RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 TMEM88BA6NKF7 163 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 TBC1D3LB9A6J9 549 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 H0Y858 1186 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 TBC1D3HP0C7X1 549 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 VAV1P15498 845 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 CYP2A13Q16696 494 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 PFKFB4Q16877 469 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 SLC45A4Q5BKX6 768 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 TBC1D3GQ6DHY5 549 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 TBC1D3CQ6IPX1 549 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 TBC1D3Q8IZP1 549 aaPredicted RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 OR8H2Q8N162 312 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 OR52K1Q8NGK4 314 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 WDR36Q8NI36 951 aaKnown RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 PANX3Q96QZ0 392 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 TLE6Q9H808 572 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 NMRAL1Q9HBL8 299 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 TRBV23OR9-2A0A075B6M9 112 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 FFAR3O14843 346 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 GPR42O15529 346 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 NPR3P17342 541 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 KLC1Q07866 573 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 TRIM71Q2Q1W2 868 aaKnown RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 FAAH2Q6GMR7 532 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 PTF1AQ7RTS3 328 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 DSELQ8IZU8 1212 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 GPR156Q8NFN8 814 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 EMID1Q96A84 441 aaPredicted RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 CPNE1Q99829 537 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 CCDC167Q9P0B6 97 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 A0A096LPK6 155 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 SCAMP1O15126 338 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 TSPAN8P19075 237 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 GABRR2P28476 465 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 NR2C2P49116 596 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 INHBEP58166 350 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 DYNC1I2Q13409 638 aaKnown RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 TBCELQ5QJ74 424 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 SPATA6LQ8N4H0 392 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 OR56A4Q8NGH8 313 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 LENG1Q96BZ8 264 aaPredicted RBP8.68□□□□□ -1.02
ABCA4-201ENST00000370225 VPS45Q9NRW7 570 aa8.68□□□□□ -1.02
ABCA4-201ENST00000370225 KLQ9UEF7 1012 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms