RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 TRHDEQ9UKU6 1024 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 AGO1Q9UL18 857 aaKnown RBP17.2■□□□□ 0.34
PHGDH-202ENST00000369409 YBX2Q9Y2T7 364 aaKnown RBP17.2■□□□□ 0.34
PHGDH-202ENST00000369409 CPQQ9Y646 472 aa17.2■□□□□ 0.34
PHGDH-202ENST00000369409 A0A1W2PRU2 124 aa17.19■□□□□ 0.34
PHGDH-202ENST00000369409 RASA4BC9J798 803 aa17.19■□□□□ 0.34
PHGDH-202ENST00000369409 TRDMT1O14717 391 aaKnown RBP17.19■□□□□ 0.34
PHGDH-202ENST00000369409 SCAMP3O14828 347 aaKnown RBP17.19■□□□□ 0.34
PHGDH-202ENST00000369409 RASA4O43374 803 aa17.19■□□□□ 0.34
PHGDH-202ENST00000369409 ABHD2P08910 425 aa17.19■□□□□ 0.34
PHGDH-202ENST00000369409 GJA1P17302 382 aa17.19■□□□□ 0.34
PHGDH-202ENST00000369409 HDCP19113 662 aa17.19■□□□□ 0.34
PHGDH-202ENST00000369409 CD68P34810 354 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-202ENST00000369409 SLCO1A2P46721 670 aa17.19■□□□□ 0.34
PHGDH-202ENST00000369409 ITPRIPL1Q6GPH6 555 aa17.19■□□□□ 0.34
PHGDH-202ENST00000369409 TIGD7Q6NT04 549 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-202ENST00000369409 MAB21L3Q8N8X9 362 aa17.19■□□□□ 0.34
PHGDH-202ENST00000369409 ZSCAN18Q8TBC5 510 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-202ENST00000369409 AZIN2Q96A70 460 aa17.19■□□□□ 0.34
PHGDH-202ENST00000369409 ATP6V1G3Q96LB4 118 aa17.19■□□□□ 0.34
PHGDH-202ENST00000369409 GORASP1Q9BQQ3 440 aa17.19■□□□□ 0.34
PHGDH-202ENST00000369409 ATXN3LQ9H3M9 355 aa17.19■□□□□ 0.34
PHGDH-202ENST00000369409 EIF2B3Q9NR50 452 aaKnown RBP17.19■□□□□ 0.34
PHGDH-202ENST00000369409 HCFC1R1Q9NWW0 138 aa17.19■□□□□ 0.34
PHGDH-202ENST00000369409 IPO11Q9UI26 975 aaKnown RBP17.19■□□□□ 0.34
PHGDH-202ENST00000369409 ZFP37Q9Y6Q3 630 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-202ENST00000369409 A0A087WUV0 522 aaPredicted RBP17.18■□□□□ 0.34
PHGDH-202ENST00000369409 TLDC2A0PJX2 215 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 ARHGAP42A6NI28 874 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 RAMP2O60895 175 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 CKMP06732 381 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 CCNB1P14635 433 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 EPCAMP16422 314 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 CDC25CP30307 473 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 OR1E1P30953 314 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 PBX2P40425 430 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 ELK3P41970 407 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 GRIA1P42261 906 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 MAPKAPK2P49137 400 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 IFI35P80217 286 aaPredicted RBP17.18■□□□□ 0.34
PHGDH-202ENST00000369409 GPM6BQ13491 265 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 LONRF1Q17RB8 773 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 C5orf22Q49AR2 442 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 RABGAP1LQ5R372 815 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 STXBP5Q5T5C0 1151 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 ZNF354CQ86Y25 554 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 AGGF1Q8N302 714 aaeCLIP17.18■□□□□ 0.34
PHGDH-202ENST00000369409 ATP11CQ8NB49 1132 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 TTC16Q8NEE8 873 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 ZNF419Q96HQ0 510 aaPredicted RBP17.18■□□□□ 0.34
PHGDH-202ENST00000369409 TEKT5Q96M29 485 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 SAMD11Q96NU1 681 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 CERS4Q9HA82 394 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 BCCIPQ9P287 314 aaKnown RBP eCLIP17.18■□□□□ 0.34
PHGDH-202ENST00000369409 TTLL3Q9Y4R7 772 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 PCDHA11Q9Y5I1 949 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 MIA3Q5JRA6 1907 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 NOTCH4Q99466 2003 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 MATN3O15232 486 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 CLASP2O75122 1294 aaKnown RBP17.18■□□□□ 0.34
PHGDH-202ENST00000369409 SGSHP51688 502 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 GPX6P59796 221 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 RPS24P62847 133 aaKnown RBP17.18■□□□□ 0.34
PHGDH-202ENST00000369409 ZXDBP98169 803 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 SKIDA1Q1XH10 827 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 CCDC38Q502W7 563 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 ADGRF1Q5T601 910 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 LRRC49Q8IUZ0 686 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 IGDCC3Q8IVU1 814 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 CNTD1Q8N815 330 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 ADAMTS19Q8TE59 1207 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 ABHD8Q96I13 439 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 TMEM109Q9BVC6 243 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 XAB2Q9HCS7 855 aaKnown RBP17.18■□□□□ 0.34
PHGDH-202ENST00000369409 TEX264Q9Y6I9 313 aa17.18■□□□□ 0.34
PHGDH-202ENST00000369409 HMGB1P1B2RPK0 211 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-202ENST00000369409 RASGRF2O14827 1237 aa17.17■□□□□ 0.34
PHGDH-202ENST00000369409 SSTR1P30872 391 aa17.17■□□□□ 0.34
PHGDH-202ENST00000369409 MAGEA3P43357 314 aa17.17■□□□□ 0.34
PHGDH-202ENST00000369409 ERVK-21P61565 698 aa17.17■□□□□ 0.34
PHGDH-202ENST00000369409 SARNPP82979 210 aaKnown RBP17.17■□□□□ 0.34
PHGDH-202ENST00000369409 CDK16Q00536 496 aa17.17■□□□□ 0.34
PHGDH-202ENST00000369409 IL12RB2Q99665 862 aa17.17■□□□□ 0.34
PHGDH-202ENST00000369409 SP110Q9HB58 689 aa17.17■□□□□ 0.34
PHGDH-202ENST00000369409 RANBP2P49792 3224 aaKnown RBP17.17■□□□□ 0.34
PHGDH-202ENST00000369409 CCDC85CA6NKD9 419 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 PER2O15055 1255 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 TSPAN3O60637 253 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 CCR2P41597 374 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 NUMBP49757 651 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 SPARCL1Q14515 664 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 POLD3Q15054 466 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-202ENST00000369409 ANO4Q32M45 955 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 PARP15Q460N3 678 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 DNAJC21Q5F1R6 531 aaKnown RBP17.16■□□□□ 0.34
PHGDH-202ENST00000369409 AGBL2Q5U5Z8 902 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.16■□□□□ 0.34
PHGDH-202ENST00000369409 ROPN1BQ9BZX4 212 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-202ENST00000369409 ROPN1Q9HAT0 212 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-202ENST00000369409 TRAV19A0A0A6YYK7 116 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms