RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 SEMA5AQ13591 1074 aa24.45■■□□□ 1.5
SNX3-203ENST00000368979 UAP1Q16222 522 aaPredicted RBP24.45■■□□□ 1.5
SNX3-203ENST00000368979 PARP15Q460N3 678 aa24.45■■□□□ 1.5
SNX3-203ENST00000368979 FAXCQ5TGI0 409 aa24.45■■□□□ 1.5
SNX3-203ENST00000368979 TIGD7Q6NT04 549 aaPredicted RBP24.45■■□□□ 1.5
SNX3-203ENST00000368979 PPP2R3CQ969Q6 453 aa24.45■■□□□ 1.5
SNX3-203ENST00000368979 SMG9Q9H0W8 520 aaKnown RBP24.45■■□□□ 1.5
SNX3-203ENST00000368979 PIDD1Q9HB75 910 aa24.45■■□□□ 1.5
SNX3-203ENST00000368979 IGSF9Q9P2J2 1179 aa24.45■■□□□ 1.5
SNX3-203ENST00000368979 MYO7AQ13402 2215 aa24.44■■□□□ 1.5
SNX3-203ENST00000368979 DOCK6Q96HP0 2047 aa24.44■■□□□ 1.5
SNX3-203ENST00000368979 A0A1B0GVM2 712 aa24.44■■□□□ 1.5
SNX3-203ENST00000368979 TCAF2A6NFQ2 919 aa24.44■■□□□ 1.5
SNX3-203ENST00000368979 SCAMP3O14828 347 aaKnown RBP24.44■■□□□ 1.5
SNX3-203ENST00000368979 MATN3O15232 486 aa24.44■■□□□ 1.5
SNX3-203ENST00000368979 TSPAN3O60637 253 aa24.44■■□□□ 1.5
SNX3-203ENST00000368979 HSD17B3P37058 310 aa24.44■■□□□ 1.5
SNX3-203ENST00000368979 PMS2P54278 862 aa24.44■■□□□ 1.5
SNX3-203ENST00000368979 TEX44Q53QW1 395 aa24.44■■□□□ 1.5
SNX3-203ENST00000368979 RELL1Q8IUW5 271 aa24.44■■□□□ 1.5
SNX3-203ENST00000368979 CPXM2Q8N436 756 aa24.44■■□□□ 1.5
SNX3-203ENST00000368979 FATE1Q969F0 183 aa24.44■■□□□ 1.5
SNX3-203ENST00000368979 PHACTR1Q9C0D0 580 aa24.44■■□□□ 1.5
SNX3-203ENST00000368979 KLHL8Q9P2G9 620 aaPredicted RBP24.44■■□□□ 1.5
SNX3-203ENST00000368979 IPO11Q9UI26 975 aaKnown RBP24.44■■□□□ 1.5
SNX3-203ENST00000368979 TRHDEQ9UKU6 1024 aa24.44■■□□□ 1.5
SNX3-203ENST00000368979 NUP205Q92621 2012 aa24.44■■□□□ 1.5
SNX3-203ENST00000368979 CEBPBP17676 345 aa24.43■■□□□ 1.5
SNX3-203ENST00000368979 GAD2Q05329 585 aa24.43■■□□□ 1.5
SNX3-203ENST00000368979 POLD3Q15054 466 aaPredicted RBP24.43■■□□□ 1.5
SNX3-203ENST00000368979 PARP6Q2NL67 630 aa24.43■■□□□ 1.5
SNX3-203ENST00000368979 TMC5Q6UXY8 1006 aa24.43■■□□□ 1.5
SNX3-203ENST00000368979 CEP128Q6ZU80 1094 aa24.43■■□□□ 1.5
SNX3-203ENST00000368979 CCDC25Q86WR0 208 aa24.43■■□□□ 1.5
SNX3-203ENST00000368979 BBS7Q8IWZ6 715 aa24.43■■□□□ 1.5
SNX3-203ENST00000368979 SH3RF2Q8TEC5 729 aa24.43■■□□□ 1.5
SNX3-203ENST00000368979 MAML1Q92585 1016 aa24.43■■□□□ 1.5
SNX3-203ENST00000368979 USP13Q92995 863 aaPredicted RBP24.43■■□□□ 1.5
SNX3-203ENST00000368979 EXOC4Q96A65 974 aa24.43■■□□□ 1.5
SNX3-203ENST00000368979 IL12RB2Q99665 862 aa24.43■■□□□ 1.5
SNX3-203ENST00000368979 NSUN3Q9H649 340 aaKnown RBP24.43■■□□□ 1.5
SNX3-203ENST00000368979 CCL26Q9Y258 94 aa24.43■■□□□ 1.5
SNX3-203ENST00000368979 SHROOM3Q8TF72 1996 aa24.42■■□□□ 1.5
SNX3-203ENST00000368979 GLP2RO95838 553 aa24.42■■□□□ 1.5
SNX3-203ENST00000368979 TPSB2P20231 275 aa24.42■■□□□ 1.5
SNX3-203ENST00000368979 TPSAB1Q15661 275 aa24.42■■□□□ 1.5
SNX3-203ENST00000368979 POTEHQ6S545 545 aa24.42■■□□□ 1.5
SNX3-203ENST00000368979 TMEM184AQ6ZMB5 413 aa24.42■■□□□ 1.5
SNX3-203ENST00000368979 PID1Q7Z2X4 250 aa24.42■■□□□ 1.5
SNX3-203ENST00000368979 MTERF4Q7Z6M4 381 aaKnown RBP24.42■■□□□ 1.5
SNX3-203ENST00000368979 HJURPQ8NCD3 748 aaPredicted RBP24.42■■□□□ 1.5
SNX3-203ENST00000368979 TEKT5Q96M29 485 aa24.42■■□□□ 1.5
SNX3-203ENST00000368979 EPB41L4BQ9H329 900 aa24.42■■□□□ 1.5
SNX3-203ENST00000368979 MRPS23Q9Y3D9 190 aaKnown RBP24.42■■□□□ 1.5
SNX3-203ENST00000368979 E2F8A0AVK6 867 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 GOLGA8MH3BSY2 632 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 ZBTB24O43167 697 aaPredicted RBP24.41■■□□□ 1.5
SNX3-203ENST00000368979 PEX11BO96011 259 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 CCNB1P14635 433 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 TCF3P15923 654 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 PSMB4P28070 264 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 CD68P34810 354 aaPredicted RBP24.41■■□□□ 1.5
SNX3-203ENST00000368979 HYAL1Q12794 435 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 SERINC3Q13530 473 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 C6orf118Q5T5N4 469 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 CHRDL2Q6WN34 429 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 SETD3Q86TU7 594 aaPredicted RBP24.41■■□□□ 1.5
SNX3-203ENST00000368979 OR52K2Q8NGK3 314 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 RIN3Q8TB24 985 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 ITFG1Q8TB96 612 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 ARHGEF2Q92974 986 aaKnown RBP24.41■■□□□ 1.5
SNX3-203ENST00000368979 RBM15Q96T37 977 aaKnown RBP eCLIP24.41■■□□□ 1.5
SNX3-203ENST00000368979 MAGEH1Q9H213 219 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 GBA3Q9H227 469 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 IGFLR1Q9H665 355 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 TDP1Q9NUW8 608 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 DNAJC17Q9NVM6 304 aaKnown RBP24.41■■□□□ 1.5
SNX3-203ENST00000368979 TBC1D30Q9Y2I9 924 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 CHD5Q8TDI0 1954 aa24.41■■□□□ 1.5
SNX3-203ENST00000368979 RANBP2P49792 3224 aaKnown RBP24.41■■□□□ 1.5
SNX3-203ENST00000368979 PRAMEF12O95522 483 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 JCHAINP01591 159 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 GNA12Q03113 381 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 USP4Q13107 963 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 ANO4Q32M45 955 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 ITPRIPL1Q6GPH6 555 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 IQCKQ8N0W5 287 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 CNTD1Q8N815 330 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 UBLCP1Q8WVY7 318 aaPredicted RBP24.4■■□□□ 1.5
SNX3-203ENST00000368979 ING5Q8WYH8 240 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 ZNF419Q96HQ0 510 aaPredicted RBP24.4■■□□□ 1.5
SNX3-203ENST00000368979 ZSWIM3Q96MP5 696 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 GORASP1Q9BQQ3 440 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 PABPC3Q9H361 631 aaKnown RBP24.4■■□□□ 1.5
SNX3-203ENST00000368979 CDC42EP4Q9H3Q1 356 aaKnown RBP24.4■■□□□ 1.5
SNX3-203ENST00000368979 SEMA4AQ9H3S1 761 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 EIF2B3Q9NR50 452 aaKnown RBP24.4■■□□□ 1.5
SNX3-203ENST00000368979 C2orf16Q68DN1 1984 aa24.4■■□□□ 1.5
SNX3-203ENST00000368979 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.4■■□□□ 1.5
SNX3-203ENST00000368979 ILVBLA1L0T0 632 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms