RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 ELAC1Q9H777 363 aaKnown RBP14.33□□□□□ -0.12
USF1-202ENST00000368020 NPHS2Q9NP85 383 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 PRDM5Q9NQX1 630 aaPredicted RBP14.33□□□□□ -0.12
USF1-202ENST00000368020 SIRPGQ9P1W8 387 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 PRKAG2Q9UGJ0 569 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 CHKBQ9Y259 395 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 RPS6KL1Q9Y6S9 549 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 WDR91A4D1P6 747 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 ARHGAP42A6NI28 874 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 ENPP3O14638 875 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 CHUKO15111 745 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 ANXA9O76027 345 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 ITGB8P26012 769 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 FNDC1Q4ZHG4 1894 aaPredicted RBP14.32□□□□□ -0.12
USF1-202ENST00000368020 PAN2Q504Q3 1202 aaKnown RBP14.32□□□□□ -0.12
USF1-202ENST00000368020 MROH9Q5TGP6 573 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 CNKSR3Q6P9H4 555 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 TMEM135Q86UB9 458 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 RASSF3Q86WH2 238 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 CCDC117Q8IWD4 279 aaPredicted RBP14.32□□□□□ -0.12
USF1-202ENST00000368020 NPWQ8N729 165 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 DNAAF3Q8N9W5 541 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 E2F7Q96AV8 911 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 VWCEQ96DN2 955 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 FAM193BQ96PV7 902 aaPredicted RBP14.32□□□□□ -0.12
USF1-202ENST00000368020 TMEM237Q96Q45 408 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 RHOBTB2Q9BYZ6 727 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 LRMDAQ9H2I8 198 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 ANLNQ9NQW6 1124 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 PCMTD2Q9NV79 361 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 SYBUQ9NX95 663 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 ZFP69BQ9UJL9 534 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 NUP205Q92621 2012 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 I6L893 689 aaPredicted RBP14.32□□□□□ -0.12
USF1-202ENST00000368020 TNFRSF10BO14763 440 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 DNAJC6O75061 913 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 EFCAB14O75071 495 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 SPRP35270 261 aaPredicted RBP14.32□□□□□ -0.12
USF1-202ENST00000368020 MAGEA11P43364 429 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 ARFIP2P53365 341 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 PDE1BQ01064 536 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 CDH17Q12864 832 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 IKBKEQ14164 716 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 TBC1D1Q86TI0 1168 aaPredicted RBP14.32□□□□□ -0.12
USF1-202ENST00000368020 LRRTM3Q86VH5 581 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 MON1AQ86VX9 555 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 NUDCD3Q8IVD9 361 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 ATPAF2Q8N5M1 289 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 STKLD1Q8NE28 680 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 HASPINQ8TF76 798 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 LINC01599Q8WXQ3 324 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 C8orf48Q96LL4 319 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 C1orf74Q96LT6 269 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 SLC13A1Q9BZW2 595 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 ZCWPW1Q9H0M4 648 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 FAM96AQ9H5X1 160 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 TMLHEQ9NVH6 421 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 KCNK4Q9NYG8 393 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 GGT7Q9UJ14 662 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 SCML2Q9UQR0 700 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 MICAL3Q7RTP6 2002 aa14.32□□□□□ -0.12
USF1-202ENST00000368020 ABHD14A-ACY1A0A1B0GW23 586 aa14.31□□□□□ -0.12
USF1-202ENST00000368020 ZBTB24O43167 697 aaPredicted RBP14.31□□□□□ -0.12
USF1-202ENST00000368020 CACNG3O60359 315 aa14.31□□□□□ -0.12
USF1-202ENST00000368020 ITGA2BP08514 1039 aa14.31□□□□□ -0.12
USF1-202ENST00000368020 BGNP21810 368 aa14.31□□□□□ -0.12
USF1-202ENST00000368020 TMPRSS15P98073 1019 aa14.31□□□□□ -0.12
USF1-202ENST00000368020 SMARCB1Q12824 385 aa14.31□□□□□ -0.12
USF1-202ENST00000368020 BMPR2Q13873 1038 aa14.31□□□□□ -0.12
USF1-202ENST00000368020 ANO4Q32M45 955 aa14.31□□□□□ -0.12
USF1-202ENST00000368020 MANEALQ5VSG8 457 aa14.31□□□□□ -0.12
USF1-202ENST00000368020 RWDD4Q6NW29 188 aaKnown RBP14.31□□□□□ -0.12
USF1-202ENST00000368020 MSANTD2Q6P1R3 559 aa14.31□□□□□ -0.12
USF1-202ENST00000368020 DEFB128Q7Z7B8 93 aa14.31□□□□□ -0.12
USF1-202ENST00000368020 TNS4Q8IZW8 715 aa14.31□□□□□ -0.12
USF1-202ENST00000368020 PTCD2Q8WV60 388 aaKnown RBP14.31□□□□□ -0.12
USF1-202ENST00000368020 ISL2Q96A47 359 aa14.31□□□□□ -0.12
USF1-202ENST00000368020 OXCT2Q9BYC2 517 aaPredicted RBP14.31□□□□□ -0.12
USF1-202ENST00000368020 TMEM161AQ9NX61 479 aa14.31□□□□□ -0.12
USF1-202ENST00000368020 HMX2A2RU54 273 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 OR6C75A6NL08 312 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 TRAFD1O14545 582 aaPredicted RBP14.3□□□□□ -0.12
USF1-202ENST00000368020 TIMM44O43615 452 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 UGT1A9O60656 530 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 BPGMP07738 259 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 CSF2RAP15509 400 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 PSEN1P49768 467 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 SERPINB8P50452 374 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 CSE1LP55060 971 aaKnown RBP14.3□□□□□ -0.12
USF1-202ENST00000368020 FAM91A1Q658Y4 838 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 LCA5Q86VQ0 697 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 CRLF3Q8IUI8 442 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 COLGALT2Q8IYK4 626 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 NUP93Q8N1F7 819 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 CRIPAKQ8N1N5 446 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 ARMC2Q8NEN0 867 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 OR52K1Q8NGK4 314 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 SREK1Q8WXA9 508 aaKnown RBP14.3□□□□□ -0.12
USF1-202ENST00000368020 DPF3Q92784 378 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 PTPRN2Q92932 1015 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms