RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 CAPN11Q9UMQ6 739 aa24.57■■□□□ 1.52
PFDN2-201ENST00000368010 BZW2Q9Y6E2 419 aaKnown RBP24.57■■□□□ 1.52
PFDN2-201ENST00000368010 VASPP50552 380 aaPredicted RBP24.56■■□□□ 1.52
PFDN2-201ENST00000368010 KRT83P78385 493 aa24.56■■□□□ 1.52
PFDN2-201ENST00000368010 NFKBIBQ15653 356 aa24.56■■□□□ 1.52
PFDN2-201ENST00000368010 C9orf64Q5T6V5 341 aa24.56■■□□□ 1.52
PFDN2-201ENST00000368010 FAM124AQ86V42 546 aa24.56■■□□□ 1.52
PFDN2-201ENST00000368010 CCDC185Q8N715 623 aa24.56■■□□□ 1.52
PFDN2-201ENST00000368010 CPLX3Q8WVH0 158 aa24.56■■□□□ 1.52
PFDN2-201ENST00000368010 C2orf49Q9BVC5 232 aaPredicted RBP24.56■■□□□ 1.52
PFDN2-201ENST00000368010 TMEM74BQ9NUR3 256 aa24.56■■□□□ 1.52
PFDN2-201ENST00000368010 OR12D3Q9UGF7 316 aa24.56■■□□□ 1.52
PFDN2-201ENST00000368010 PILRBQ9UKJ0 227 aa24.56■■□□□ 1.52
PFDN2-201ENST00000368010 SCML1Q9UN30 329 aa24.56■■□□□ 1.52
PFDN2-201ENST00000368010 CEP250Q9BV73 2442 aa24.56■■□□□ 1.52
PFDN2-201ENST00000368010 PATE3B3GLJ2 98 aa24.55■■□□□ 1.52
PFDN2-201ENST00000368010 RTN2O75298 545 aa24.55■■□□□ 1.52
PFDN2-201ENST00000368010 FTLP02792 175 aaPredicted RBP24.55■■□□□ 1.52
PFDN2-201ENST00000368010 MAMLD1Q13495 774 aa24.55■■□□□ 1.52
PFDN2-201ENST00000368010 SYCP2LQ5T4T6 812 aa24.55■■□□□ 1.52
PFDN2-201ENST00000368010 ARTNQ5T4W7 220 aa24.55■■□□□ 1.52
PFDN2-201ENST00000368010 MANEALQ5VSG8 457 aa24.55■■□□□ 1.52
PFDN2-201ENST00000368010 PEAR1Q5VY43 1037 aaPredicted RBP24.55■■□□□ 1.52
PFDN2-201ENST00000368010 PLEKHA7Q6IQ23 1121 aa24.55■■□□□ 1.52
PFDN2-201ENST00000368010 SCYL2Q6P3W7 929 aa24.55■■□□□ 1.52
PFDN2-201ENST00000368010 SLFN11Q7Z7L1 901 aa24.55■■□□□ 1.52
PFDN2-201ENST00000368010 VPS36Q86VN1 386 aa24.55■■□□□ 1.52
PFDN2-201ENST00000368010 DCAF4L2Q8NA75 395 aa24.55■■□□□ 1.52
PFDN2-201ENST00000368010 CADM4Q8NFZ8 388 aa24.55■■□□□ 1.52
PFDN2-201ENST00000368010 PTPRN2Q92932 1015 aa24.55■■□□□ 1.52
PFDN2-201ENST00000368010 RTKNQ9BST9 563 aa24.55■■□□□ 1.52
PFDN2-201ENST00000368010 RXFP3Q9NSD7 469 aa24.55■■□□□ 1.52
PFDN2-201ENST00000368010 EVLQ9UI08 416 aaPredicted RBP24.55■■□□□ 1.52
PFDN2-201ENST00000368010 LUC7L2Q9Y383 392 aaKnown RBP24.55■■□□□ 1.52
PFDN2-201ENST00000368010 SPTBN4Q9H254 2564 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 SLC30A4O14863 429 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 ATMINO43313 823 aaPredicted RBP24.54■■□□□ 1.52
PFDN2-201ENST00000368010 CBFA2T2O43439 604 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 GYPCP04921 128 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 LIMK1P53667 647 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 SCAPQ12770 1279 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 SFSWAPQ12872 951 aaKnown RBP24.54■■□□□ 1.52
PFDN2-201ENST00000368010 ELAVL3Q14576 367 aaKnown RBP24.54■■□□□ 1.52
PFDN2-201ENST00000368010 ACCSLQ4AC99 568 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 TRIM61Q5EBN2 209 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 EFHC2Q5JST6 749 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 WDR45BQ5MNZ6 344 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 HGSNATQ68CP4 663 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 RWDD4Q6NW29 188 aaKnown RBP24.54■■□□□ 1.52
PFDN2-201ENST00000368010 ZNF783Q6ZMS7 281 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 RABEPKQ7Z6M1 372 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 RGL4Q8IZJ4 473 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 TRIM11Q96F44 468 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 PSMB7Q99436 277 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 EDEM2Q9BV94 578 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 PABPC3Q9H361 631 aaKnown RBP24.54■■□□□ 1.52
PFDN2-201ENST00000368010 ZNF212Q9UDV6 495 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 CNOT8Q9UFF9 292 aaKnown RBP24.54■■□□□ 1.52
PFDN2-201ENST00000368010 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.54■■□□□ 1.521e-13■■□□□ 11.7
PFDN2-201ENST00000368010 NUP205Q92621 2012 aa24.54■■□□□ 1.52
PFDN2-201ENST00000368010 TNRC6BQ9UPQ9 1833 aaKnown RBP24.54■■□□□ 1.52
PFDN2-201ENST00000368010 A0A0D9SEW6 157 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 LNP1A1A4G5 178 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 ILVBLA1L0T0 632 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 MEI4A8MW99 385 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 ATP9BO43861 1147 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 LRIG2O94898 1065 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 SERPING1P05155 500 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 PLEKP08567 350 aaPredicted RBP24.53■■□□□ 1.52
PFDN2-201ENST00000368010 OGDHQ02218 1023 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 CST6Q15828 149 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 TMC6Q7Z403 805 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 DNAAF5Q86Y56 855 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 MMAAQ8IVH4 418 aaKnown RBP24.53■■□□□ 1.52
PFDN2-201ENST00000368010 STK40Q8N2I9 435 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 RNF214Q8ND24 703 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 CEP76Q8TAP6 659 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 FRS2Q8WU20 508 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 ZNF653Q96CK0 615 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 TBC1D31Q96DN5 1066 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.53■■□□□ 1.52
PFDN2-201ENST00000368010 NUSAP1Q9BXS6 441 aaKnown RBP24.53■■□□□ 1.52
PFDN2-201ENST00000368010 BTBD1Q9H0C5 482 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 PCED1AQ9H1Q7 454 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 RETREG1Q9H6L5 497 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 VPS51Q9UID3 782 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 HS3ST2Q9Y278 367 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 NCKAP1Q9Y2A7 1128 aa24.53■■□□□ 1.52
PFDN2-201ENST00000368010 FAM72CH0Y354 149 aa24.52■■□□□ 1.52
PFDN2-201ENST00000368010 SNAP91O60641 907 aa24.52■■□□□ 1.52
PFDN2-201ENST00000368010 MYBL1P10243 752 aa24.52■■□□□ 1.52
PFDN2-201ENST00000368010 VAV1P15498 845 aa24.52■■□□□ 1.52
PFDN2-201ENST00000368010 RHOQP17081 205 aa24.52■■□□□ 1.52
PFDN2-201ENST00000368010 PSMA2P25787 234 aa24.52■■□□□ 1.52
PFDN2-201ENST00000368010 AIF1P55008 147 aa24.52■■□□□ 1.52
PFDN2-201ENST00000368010 DUOXA1Q1HG43 343 aa24.52■■□□□ 1.52
PFDN2-201ENST00000368010 FAM72AQ5TYM5 149 aa24.52■■□□□ 1.52
PFDN2-201ENST00000368010 FAM72DQ6L9T8 149 aa24.52■■□□□ 1.52
PFDN2-201ENST00000368010 USP30Q70CQ3 517 aa24.52■■□□□ 1.52
PFDN2-201ENST00000368010 DGLUCYQ7Z3D6 616 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms