RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 CENPLQ8N0S6 344 aaPredicted RBP11.67□□□□□ -0.54
RD3-201ENST00000367002 SHISA4Q96DD7 197 aa11.67□□□□□ -0.54
RD3-201ENST00000367002 FAM120BQ96EK7 910 aaKnown RBP11.67□□□□□ -0.54
RD3-201ENST00000367002 TMEM169Q96HH4 297 aa11.67□□□□□ -0.54
RD3-201ENST00000367002 MARK4Q96L34 752 aa11.67□□□□□ -0.54
RD3-201ENST00000367002 ADGRE3Q9BY15 652 aa11.67□□□□□ -0.54
RD3-201ENST00000367002 PARVBQ9HBI1 364 aa11.67□□□□□ -0.54
RD3-201ENST00000367002 BTBD7Q9P203 1132 aa11.67□□□□□ -0.54
RD3-201ENST00000367002 C3P01024 1663 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 RGSL1A5PLK6 1076 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 PDHXO00330 501 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 KATNA1O75449 491 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 CCDC166P0CW27 439 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 SLC2A4P14672 509 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 DDX5P17844 614 aaKnown RBP11.66□□□□□ -0.54
RD3-201ENST00000367002 GRIA4P48058 902 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 RHOAP61586 193 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 MSLNQ13421 630 aaPredicted RBP11.66□□□□□ -0.54
RD3-201ENST00000367002 TJAP1Q5JTD0 557 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 PCID2Q5JVF3 399 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 DHDDSQ86SQ9 333 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.66□□□□□ -0.54
RD3-201ENST00000367002 GSTCDQ8NEC7 633 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 MBOAT7Q96N66 472 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 SERPINB11Q96P15 392 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 GRIP2Q9C0E4 1043 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 LHX5Q9H2C1 402 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 SCUBE2Q9NQ36 999 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 CLIC5Q9NZA1 410 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 FAM50BQ9Y247 325 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 FANCGO15287 622 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 BIRC5O15392 142 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 BUD23O43709 281 aaKnown RBP11.66□□□□□ -0.54
RD3-201ENST00000367002 ARF4P18085 180 aaPredicted RBP11.66□□□□□ -0.54
RD3-201ENST00000367002 MZF1P28698 734 aaPredicted RBP11.66□□□□□ -0.54
RD3-201ENST00000367002 AXLP30530 894 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 LRPAP1P30533 357 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 GBE1Q04446 702 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 VAC14Q08AM6 782 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 EML3Q32P44 896 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 ZDHHC24Q6UX98 284 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 B3GALNT2Q8NCR0 500 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 LPCAT1Q8NF37 534 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 P2RY11Q96G91 374 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 PAIP1Q9H074 479 aaKnown RBP11.66□□□□□ -0.54
RD3-201ENST00000367002 ELOVL6Q9H5J4 265 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 TRPM5Q9NZQ8 1165 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 PCDHB7Q9Y5E2 793 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 C2orf71A6NGG8 1288 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 ARHGEF9O43307 516 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 FAM155BO75949 473 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 GUCA1CO95843 209 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 BPGMP07738 259 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 SOAT1P35610 550 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 ZNF135P52742 658 aaPredicted RBP11.66□□□□□ -0.54
RD3-201ENST00000367002 CSTF3Q12996 717 aaKnown RBP11.66□□□□□ -0.54
RD3-201ENST00000367002 C16orf72Q14CZ0 275 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 PACS1Q6VY07 963 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 PLPPR4Q7Z2D5 763 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 PIWIL4Q7Z3Z4 852 aaKnown RBP11.66□□□□□ -0.54
RD3-201ENST00000367002 RNF180Q86T96 592 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 C10orf107Q8IVU9 208 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 DAW1Q8N136 415 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 DHRSXQ8N5I4 330 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 C12orf50Q8NA57 414 aaPredicted RBP11.66□□□□□ -0.54
RD3-201ENST00000367002 KCTD4Q8WVF5 259 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 DLG3Q92796 817 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 CDCA5Q96FF9 252 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 ZFRQ96KR1 1074 aaKnown RBP11.66□□□□□ -0.54
RD3-201ENST00000367002 ELOVL4Q9GZR5 314 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 FBXO44Q9H4M3 255 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 PRDM16Q9HAZ2 1276 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 SNCAIPQ9Y6H5 919 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 GRIN2DO15399 1336 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 DLG5Q8TDM6 1919 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 ATP6AP2A0A1C7CYW4 349 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 PLSCR1O15162 318 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 ATP6AP2O75787 350 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 PARNO95453 639 aaKnown RBP11.66□□□□□ -0.54
RD3-201ENST00000367002 ERBB2P04626 1255 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 ITGB6P18564 788 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 FGFR3P22607 806 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 DEFA1P59665 94 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 DEFA3P59666 94 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 UBE3AQ05086 875 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 PTP4A2Q12974 167 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 NEDD8Q15843 81 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 DEPDC1Q5TB30 811 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 ZNF280DQ6N043 979 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 ATG16L2Q8NAA4 619 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 DPY30Q9C005 99 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 ALG9Q9H6U8 611 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 PNPOQ9NVS9 261 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 PLLPQ9Y342 182 aa11.66□□□□□ -0.54
RD3-201ENST00000367002 NFAT5O94916 1531 aa11.65□□□□□ -0.54
RD3-201ENST00000367002 VIRMAQ69YN4 1812 aaKnown RBP11.65□□□□□ -0.54
RD3-201ENST00000367002 KNDC1Q76NI1 1749 aa11.65□□□□□ -0.54
RD3-201ENST00000367002 B4GALT4O60513 344 aa11.65□□□□□ -0.54
RD3-201ENST00000367002 MTA2O94776 668 aa11.65□□□□□ -0.54
RD3-201ENST00000367002 ATP5F1P24539 256 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms