RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 DCLK3Q9C098 648 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 PIGUQ9H490 435 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 STN1Q9H668 368 aaKnown RBP11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 RNF112Q9ULX5 631 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 GSC2O15499 205 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 TIPRLO75663 272 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 PABPC1P11940 636 aaKnown RBP11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 CDK8P49336 464 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 XIAPP98170 497 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 CLNKQ7Z7G1 428 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 ILDR1Q86SU0 546 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 TTYH2Q9BSA4 534 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 NINJ2Q9NZG7 142 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 PRKAB1Q9Y478 270 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 ZBTB5O15062 677 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 CD83Q01151 205 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 TRIM72Q6ZMU5 477 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 CPSF4O95639 269 aaKnown RBP11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 TIGD2Q4W5G0 525 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 RASAL3Q86YV0 1011 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 ASCC1Q8N9N2 400 aaKnown RBP11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 PCDHA6Q9UN73 950 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 PCDHA8Q9Y5H6 950 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 MADDQ8WXG6 1647 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 M0QX08 132 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 SUZ12Q15022 739 aaKnown RBP11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 KLHL35Q6PF15 583 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 TMEM106CQ9BVX2 250 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 MRPS7Q9Y2R9 242 aaKnown RBP11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 TGM2P21980 687 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 AKAP5P24588 427 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 SVOPQ8N4V2 548 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 PIK3R3Q92569 461 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 MED8Q96G25 268 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 VPS45Q9NRW7 570 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 MCUBQ9NWR8 336 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 ZC3H13Q5T200 1668 aaKnown RBP11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 CIR1Q86X95 450 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 C12orf56Q8IXR9 622 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 C12orf50Q8NA57 414 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 S100A13Q99584 98 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 PHF24Q9UPV7 400 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 TNNI3P19429 210 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 AFTPHQ6ULP2 937 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 CAMK1DQ8IU85 385 aa11.24□□□□□ -0.61
CDC42BPA-205ENST00000366769 MYO7AQ13402 2215 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 SH3D21A4FU49 640 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 PSMD3O43242 534 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 HLA-DQA2P01906 255 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 TPBGLP0DKB5 382 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 PORP16435 677 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 STIP1P31948 543 aaKnown RBP11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 MYBPC1Q00872 1141 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 C2CD6Q53TS8 623 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 ESRP1Q6NXG1 681 aaKnown RBP11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 ZNF571Q7Z3V5 609 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 CYP4Z1Q86W10 505 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 SYN2Q92777 582 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 MBOAT7Q96N66 472 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 C2orf40Q9H1Z8 148 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 RIC8BQ9NVN3 520 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 AGO2Q9UKV8 859 aaKnown RBP11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 CRTAMO95727 393 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 CYP2D6P10635 497 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 GNG2P59768 71 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 OLFML2AQ68BL7 652 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 GATAD2BQ8WXI9 593 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 ACAD9Q9H845 621 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 CNOT7Q9UIV1 285 aaKnown RBP11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 N4BP2Q86UW6 1770 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 LRRC14BA6NHZ5 514 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 TP73O15350 636 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 CCR4P51679 360 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 CDH15P55291 814 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 MSLNQ13421 630 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 TMEM132DQ14C87 1099 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 CACHD1Q5VU97 1274 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 FAM228AQ86W67 206 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 BLOC1S5Q8TDH9 187 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 BTBD9Q96Q07 612 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 MAP3K14Q99558 947 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 FAM49BQ9NUQ9 324 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 VAV3Q9UKW4 847 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 PIKFYVEQ9Y2I7 2098 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 WEE1P30291 646 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 GRK4P32298 578 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 CDH18Q13634 790 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 LRP8Q14114 963 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 C10orf120Q5SQS8 335 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 UBE2UQ5VVX9 321 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 AADACL2Q6P093 401 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 PROSER1Q86XN7 944 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 GALNT12Q8IXK2 581 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 SLC7A14Q8TBB6 771 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 OSGEPQ9NPF4 335 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 CDH22Q9UJ99 828 aa11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 ABCB1P08183 1280 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 FDPSP14324 419 aaKnown RBP11.23□□□□□ -0.61
CDC42BPA-205ENST00000366769 CEBPGP53567 150 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms