RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ADHFE1Q8IWW8 467 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 ARHGAP28Q9P2N2 729 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 HACL1Q9UJ83 578 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 LACTBL1A8MY62 500 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 CYBBP04839 570 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZC3H3Q8IXZ2 948 aaKnown RBP12□□□□□ -0.49
CDC42BPA-202ENST00000366764 CLK4Q9HAZ1 481 aaKnown RBP12□□□□□ -0.49
CDC42BPA-202ENST00000366764 SEZ6Q53EL9 994 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 ELOVL4Q9GZR5 314 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 DENND2DQ9H6A0 471 aaPredicted RBP12□□□□□ -0.49
CDC42BPA-202ENST00000366764 PCDHA2Q9Y5H9 948 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12□□□□□ -0.49
CDC42BPA-202ENST00000366764 EFCAB14O75071 495 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 GSNP06396 782 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 ATP6V1E1P36543 226 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 SYTL3Q4VX76 610 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 GLMNQ92990 594 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 RHOJQ9H4E5 214 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 CYLDQ9NQC7 956 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 CIDEBQ9UHD4 219 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 COG5Q9UP83 839 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 TADA2AO75478 443 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 SNRPB2P08579 225 aaKnown RBP12□□□□□ -0.49
CDC42BPA-202ENST00000366764 ANXA11P50995 505 aaKnown RBP12□□□□□ -0.49
CDC42BPA-202ENST00000366764 PSME3P61289 254 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 ARMCX4Q5H9R4 360 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 MYO1HQ8N1T3 1032 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 EIF2B3Q9NR50 452 aaKnown RBP12□□□□□ -0.49
CDC42BPA-202ENST00000366764 GPATCH2LQ9NWQ4 482 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 F5H5T6 163 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 MAP3K6O95382 1288 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 SLC4A11Q8NBS3 891 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 PPP1R14BQ96C90 147 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 ANAPC2Q9UJX6 822 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 POLIQ9UNA4 740 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZSCAN5DPP0CG00 497 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZRANB3Q5FWF4 1079 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 C10orf120Q5SQS8 335 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 LEMD2Q8NC56 503 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 ELP3Q9H9T3 547 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 RGS18Q9NS28 235 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 CRLS1Q9UJA2 301 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 R3HDM2Q9Y2K5 976 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 CCDC154A6NI56 674 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 TISP43B9A030 160 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 H3BRB1 525 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 ITGALP20701 1170 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 C4BPBP20851 252 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 DGUOKQ16854 277 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 LRRC52Q8N7C0 313 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 ACO2Q99798 780 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 NMUR2Q9GZQ4 415 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 TUT1Q9H6E5 874 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 SIX2Q9NPC8 291 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 RBM22Q9NW64 420 aaKnown RBP eCLIP11.99□□□□□ -0.491e-6■■■■□ 19.3
CDC42BPA-202ENST00000366764 UBA1P22314 1058 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 BROXQ5VW32 411 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 RELL1Q8IUW5 271 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 CNTD1Q8N815 330 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 ANKRD52Q8NB46 1076 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 PCDHB18PQ96TA0 734 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 S100A14Q9HCY8 104 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 CXCL11O14625 94 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 LTA4HP09960 611 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 IDO1P14902 403 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 ACCSLQ4AC99 568 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 KRT73Q86Y46 540 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 FAM198AQ9UFP1 575 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 C17orf102A2RUQ5 167 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 SMIM22K7EJ46 135 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 INSRRP14616 1297 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 HTR7P34969 479 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 ANKS6Q68DC2 871 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZCCHC7Q8N3Z6 543 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 SNCAIPQ9Y6H5 919 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 FAM95CA0A1B0GW59 222 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 GPR182O15218 404 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 DLGAP3O95886 979 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 ATP6V1B2P21281 511 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 ORC1Q13415 861 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 SPANXN2Q5MJ10 180 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 POTEHQ6S545 545 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 SZRD1Q7Z422 152 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 CDHR5Q9HBB8 845 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 MAFO75444 373 aaPredicted RBP11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 LTFP02788 710 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 NOMO1Q15155 1222 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 FAM45BPQ6NSW5 357 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 ANKS3Q6ZW76 656 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 TADA1Q96BN2 335 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 PLEKHA8Q96JA3 519 aa11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 CDV3Q9UKY7 258 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-202ENST00000366764 MDM4O15151 490 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 ERVK-10P10266 1014 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 BANPQ8N9N5 519 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 SYT15Q9BQS2 421 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 COPS7BQ9H9Q2 264 aaPredicted RBP11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 GPRC5DQ9NZD1 345 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 DERAQ9Y315 318 aa11.98□□□□□ -0.49
CDC42BPA-202ENST00000366764 MTF2Q9Y483 593 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms