RNA–Protein interactions for RNA: ENST00000366746.7

MRPL55-217, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-217ENST00000366746 PLK1P53350 603 aa17.22■□□□□ 0.35
MRPL55-217ENST00000366746 TTC39BQ5VTQ0 682 aaPredicted RBP17.22■□□□□ 0.35
MRPL55-217ENST00000366746 DENND1BQ6P3S1 775 aa17.22■□□□□ 0.35
MRPL55-217ENST00000366746 ARHGEF19Q8IW93 802 aa17.22■□□□□ 0.35
MRPL55-217ENST00000366746 SPATA20Q8TB22 786 aa17.22■□□□□ 0.35
MRPL55-217ENST00000366746 SLC39A7Q92504 469 aa17.22■□□□□ 0.35
MRPL55-217ENST00000366746 ERCC4Q92889 916 aaPredicted RBP17.22■□□□□ 0.35
MRPL55-217ENST00000366746 RNF34Q969K3 372 aa17.22■□□□□ 0.35
MRPL55-217ENST00000366746 THAP9Q9H5L6 903 aa17.22■□□□□ 0.35
MRPL55-217ENST00000366746 GCN1Q92616 2671 aaKnown RBP17.22■□□□□ 0.35
MRPL55-217ENST00000366746 ASXL3Q9C0F0 2248 aa17.21■□□□□ 0.35
MRPL55-217ENST00000366746 C1QTNF3-AMACRE9PGA6 284 aa17.21■□□□□ 0.35
MRPL55-217ENST00000366746 PLRG1O43660 514 aaKnown RBP17.21■□□□□ 0.35
MRPL55-217ENST00000366746 ZNF18P17022 549 aa17.21■□□□□ 0.35
MRPL55-217ENST00000366746 GLDCP23378 1020 aa17.21■□□□□ 0.35
MRPL55-217ENST00000366746 METAP1P53582 386 aa17.21■□□□□ 0.35
MRPL55-217ENST00000366746 TMEM110Q86TL2 294 aa17.21■□□□□ 0.35
MRPL55-217ENST00000366746 TRIM69Q86WT6 500 aa17.21■□□□□ 0.35
MRPL55-217ENST00000366746 CIR1Q86X95 450 aaPredicted RBP17.21■□□□□ 0.35
MRPL55-217ENST00000366746 FRS2Q8WU20 508 aa17.21■□□□□ 0.35
MRPL55-217ENST00000366746 FGF11Q92914 225 aa17.21■□□□□ 0.35
MRPL55-217ENST00000366746 FAM131CQ96AQ9 280 aa17.21■□□□□ 0.35
MRPL55-217ENST00000366746 SLC4A5Q9BY07 1137 aa17.21■□□□□ 0.35
MRPL55-217ENST00000366746 PRORYQ9H606 182 aa17.21■□□□□ 0.35
MRPL55-217ENST00000366746 SLC25A13Q9UJS0 675 aa17.21■□□□□ 0.35
MRPL55-217ENST00000366746 CNTN6Q9UQ52 1028 aa17.21■□□□□ 0.35
MRPL55-217ENST00000366746 CLCA2Q9UQC9 943 aa17.21■□□□□ 0.35
MRPL55-217ENST00000366746 BPTFQ12830 3046 aa17.21■□□□□ 0.34
MRPL55-217ENST00000366746 A0A1B0GVM2 712 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 TCAF2A6NFQ2 919 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 E5RJQ4 531 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 PRAMEF26H0Y7S4 382 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 ATXN7O15265 892 aaPredicted RBP17.2■□□□□ 0.34
MRPL55-217ENST00000366746 SDC3O75056 442 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 LETM1O95202 739 aaPredicted RBP17.2■□□□□ 0.34
MRPL55-217ENST00000366746 IGLV3-25P01717 112 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 PRB1P04280 392 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 ACP1P24666 158 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 CCR1P32246 355 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 PPP1R2P41236 205 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 CDK17Q00537 523 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 E2F1Q01094 437 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 CNTN1Q12860 1018 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 MEA1Q16626 185 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 SETMARQ53H47 684 aaPredicted RBP17.2■□□□□ 0.34
MRPL55-217ENST00000366746 HS1BP3Q53T59 392 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 ISM2Q6H9L7 571 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 KANSL1Q7Z3B3 1105 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 CACTIN-AS1Q8N1I8 211 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 SNIP1Q8TAD8 396 aaKnown RBP17.2■□□□□ 0.34
MRPL55-217ENST00000366746 KLHDC7BQ96G42 594 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 KREMEN1Q96MU8 473 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 RPRD1AQ96P16 312 aaPredicted RBP17.2■□□□□ 0.34
MRPL55-217ENST00000366746 FCRL3Q96P31 734 aaPredicted RBP17.2■□□□□ 0.34
MRPL55-217ENST00000366746 PRMT1Q99873 361 aaKnown RBP17.2■□□□□ 0.34
MRPL55-217ENST00000366746 FAM204AQ9H8W3 233 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 SARDHQ9UL12 918 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 PPM1HQ9ULR3 514 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 RAI2Q9Y5P3 530 aa17.2■□□□□ 0.34
MRPL55-217ENST00000366746 SMG1Q96Q15 3661 aaKnown RBP17.2■□□□□ 0.34
MRPL55-217ENST00000366746 SYNJ2BP-COX16A0A087WUM0 186 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-217ENST00000366746 MCF2LO15068 1137 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 ALOX15BO15296 676 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 ATP9BO43861 1147 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 BRINP1O60477 761 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 ACTN2P35609 894 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 VASPP50552 380 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-217ENST00000366746 KCNH2Q12809 1159 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 ZNF177Q13360 481 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-217ENST00000366746 ZNF211Q13398 564 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-217ENST00000366746 DLG2Q15700 870 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 PROX2Q3B8N5 592 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 POM121L1PQ3SYA9 428 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 KLHL10Q6JEL2 608 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 CXorf57Q6NSI4 855 aaKnown RBP17.19■□□□□ 0.34
MRPL55-217ENST00000366746 FBXL22Q6P050 247 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 ZNF606Q8WXB4 792 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 RFFLQ8WZ73 363 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 FEM1AQ9BSK4 669 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 UBE2TQ9NPD8 197 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-217ENST00000366746 DDIT4Q9NX09 232 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 COX16Q9P0S2 106 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 VPS28Q9UK41 221 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 COL5A1P20908 1838 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-217ENST00000366746 KNTC1P50748 2209 aa17.19■□□□□ 0.34
MRPL55-217ENST00000366746 TMEM131Q92545 1883 aa17.18■□□□□ 0.34
MRPL55-217ENST00000366746 THAP12O43422 761 aa17.18■□□□□ 0.34
MRPL55-217ENST00000366746 SIGLEC6O43699 453 aa17.18■□□□□ 0.34
MRPL55-217ENST00000366746 BNIP3LO60238 219 aa17.18■□□□□ 0.34
MRPL55-217ENST00000366746 RNGTTO60942 597 aaKnown RBP17.18■□□□□ 0.34
MRPL55-217ENST00000366746 PITX1P78337 314 aaPredicted RBP17.18■□□□□ 0.34
MRPL55-217ENST00000366746 INSM1Q01101 510 aaPredicted RBP17.18■□□□□ 0.34
MRPL55-217ENST00000366746 EIF4EBP2Q13542 120 aaPredicted RBP17.18■□□□□ 0.34
MRPL55-217ENST00000366746 AUHQ13825 339 aaKnown RBP17.18■□□□□ 0.34
MRPL55-217ENST00000366746 TAF5Q15542 800 aa17.18■□□□□ 0.34
MRPL55-217ENST00000366746 AGBL4Q5VU57 503 aa17.18■□□□□ 0.34
MRPL55-217ENST00000366746 DCBLD1Q8N8Z6 715 aa17.18■□□□□ 0.34
MRPL55-217ENST00000366746 LSM14AQ8ND56 463 aaKnown RBP17.18■□□□□ 0.34
MRPL55-217ENST00000366746 INTS2Q9H0H0 1204 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms