RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 KCNJ12Q14500 433 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 NR1I3Q14994 352 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 KRT31Q15323 416 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 MEA1Q16626 185 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 MS4A13Q5J8X5 152 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 PITRM1Q5JRX3 1037 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 NCEH1Q6PIU2 408 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 LAYNQ6UX15 382 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 BEND5Q7L4P6 421 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 DSG4Q86SJ6 1040 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 CHSY1Q86X52 802 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 MMAAQ8IVH4 418 aaKnown RBP12.81□□□□□ -0.36
MRPL55-209ENST00000366735 SCUBE3Q8IX30 993 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 ATP6V0D2Q8N8Y2 350 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 DQX1Q8TE96 717 aaKnown RBP12.81□□□□□ -0.36
MRPL55-209ENST00000366735 TFAP2BQ92481 460 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 MYO19Q96H55 970 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 BTN2A3PQ96KV6 586 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 FCRL2Q96LA5 508 aaPredicted RBP12.81□□□□□ -0.36
MRPL55-209ENST00000366735 SLC6A18Q96N87 628 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 NAP1L5Q96NT1 182 aaPredicted RBP12.81□□□□□ -0.36
MRPL55-209ENST00000366735 SRRTQ9BXP5 876 aaKnown RBP12.81□□□□□ -0.36
MRPL55-209ENST00000366735 PRM3Q9NNZ6 103 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 ERVW-1Q9UQF0 538 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 URB1O60287 2271 aaKnown RBP12.81□□□□□ -0.36
MRPL55-209ENST00000366735 DOCK9Q9BZ29 2069 aa12.81□□□□□ -0.36
MRPL55-209ENST00000366735 TRABD2BA6NFA1 517 aa12.8□□□□□ -0.36
MRPL55-209ENST00000366735 ENC1O14682 589 aa12.8□□□□□ -0.36
MRPL55-209ENST00000366735 RFPL3O75679 317 aa12.8□□□□□ -0.36
MRPL55-209ENST00000366735 LDOC1O95751 146 aaPredicted RBP12.8□□□□□ -0.36
MRPL55-209ENST00000366735 PTMAP06454 111 aaKnown RBP12.8□□□□□ -0.36
MRPL55-209ENST00000366735 SLC2A3P11169 496 aa12.8□□□□□ -0.36
MRPL55-209ENST00000366735 GOT1P17174 413 aa12.8□□□□□ -0.36
MRPL55-209ENST00000366735 PSMD8P48556 350 aa12.8□□□□□ -0.36
MRPL55-209ENST00000366735 RPS24P62847 133 aaKnown RBP12.8□□□□□ -0.36
MRPL55-209ENST00000366735 CYP4F3Q08477 520 aa12.8□□□□□ -0.36
MRPL55-209ENST00000366735 ELAVL3Q14576 367 aaKnown RBP12.8□□□□□ -0.36
MRPL55-209ENST00000366735 FILIP1LQ4L180 1135 aa12.8□□□□□ -0.36
MRPL55-209ENST00000366735 RABGAP1LQ5R372 815 aa12.8□□□□□ -0.36
MRPL55-209ENST00000366735 NADSYN1Q6IA69 706 aa12.8□□□□□ -0.36
MRPL55-209ENST00000366735 DHRS13Q6UX07 377 aa12.8□□□□□ -0.36
MRPL55-209ENST00000366735 VSTM4Q8IW00 320 aa12.8□□□□□ -0.36
MRPL55-209ENST00000366735 DRC7Q8IY82 874 aa12.8□□□□□ -0.36
MRPL55-209ENST00000366735 LGI2Q8N0V4 545 aa12.8□□□□□ -0.36
MRPL55-209ENST00000366735 CLEC4CQ8WTT0 213 aa12.8□□□□□ -0.36
MRPL55-209ENST00000366735 HNRNPLLQ8WVV9 542 aaKnown RBP12.8□□□□□ -0.36
MRPL55-209ENST00000366735 CNDP2Q96KP4 475 aaKnown RBP12.8□□□□□ -0.36
MRPL55-209ENST00000366735 NUCKS1Q9H1E3 243 aaKnown RBP12.8□□□□□ -0.36
MRPL55-209ENST00000366735 SLCO1B1Q9Y6L6 691 aa12.8□□□□□ -0.36
MRPL55-209ENST00000366735 TDRD6O60522 2096 aaKnown RBP12.79□□□□□ -0.36
MRPL55-209ENST00000366735 SLC7A4O43246 635 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 GNA14O95837 355 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 IL1BP01584 269 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 KRT5P13647 590 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 ABCG1P45844 678 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 COPB1P53618 953 aaKnown RBP12.79□□□□□ -0.36
MRPL55-209ENST00000366735 ADPRHP54922 357 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 TUSC1Q2TAM9 212 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 HSP90AA4PQ58FG1 418 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 DCAF6Q58WW2 860 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 C9orf64Q5T6V5 341 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 FAM46CQ5VWP2 391 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 NAPEPLDQ6IQ20 393 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 PRPF39Q86UA1 669 aaKnown RBP12.79□□□□□ -0.36
MRPL55-209ENST00000366735 TAC4Q86UU9 113 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 SPC24Q8NBT2 197 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 OR14C36Q8NHC7 312 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 SLC39A13Q96H72 371 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 LRIG1Q96JA1 1093 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 SERAC1Q96JX3 654 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 LMLNQ96KR4 655 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 MRGPRX3Q96LB0 322 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 FAM81BQ96LP2 452 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 SPAG5Q96R06 1193 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 ORAI3Q9BRQ5 295 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 NEUROG2Q9H2A3 272 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 MTG2Q9H4K7 406 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 POPDC2Q9HBU9 364 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 SERGEFQ9UGK8 458 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 SLC25A13Q9UJS0 675 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 INTS6Q9UL03 887 aaKnown RBP12.79□□□□□ -0.36
MRPL55-209ENST00000366735 LAMA5O15230 3695 aa12.79□□□□□ -0.36
MRPL55-209ENST00000366735 KNTC1P50748 2209 aa12.78□□□□□ -0.36
MRPL55-209ENST00000366735 DOCK4Q8N1I0 1966 aa12.78□□□□□ -0.36
MRPL55-209ENST00000366735 NBEAQ8NFP9 2946 aa12.78□□□□□ -0.36
MRPL55-209ENST00000366735 A0A087WV48 116 aa12.78□□□□□ -0.36
MRPL55-209ENST00000366735 A0A1B0GVM2 712 aa12.78□□□□□ -0.36
MRPL55-209ENST00000366735 TCAF2A6NFQ2 919 aa12.78□□□□□ -0.36
MRPL55-209ENST00000366735 TTC34A8MYJ7 566 aa12.78□□□□□ -0.36
MRPL55-209ENST00000366735 C1QTNF3-AMACRE9PGA6 284 aa12.78□□□□□ -0.36
MRPL55-209ENST00000366735 KCNK3O14649 394 aa12.78□□□□□ -0.36
MRPL55-209ENST00000366735 JUPP14923 745 aa12.78□□□□□ -0.36
MRPL55-209ENST00000366735 TACR2P21452 398 aa12.78□□□□□ -0.36
MRPL55-209ENST00000366735 MZF1P28698 734 aaPredicted RBP12.78□□□□□ -0.36
MRPL55-209ENST00000366735 EPHA8P29322 1005 aaPredicted RBP12.78□□□□□ -0.36
MRPL55-209ENST00000366735 PBX1P40424 430 aa12.78□□□□□ -0.36
MRPL55-209ENST00000366735 MARSP56192 900 aaKnown RBP12.78□□□□□ -0.36
MRPL55-209ENST00000366735 GSDMDP57764 484 aa12.78□□□□□ -0.36
MRPL55-209ENST00000366735 OVGP1Q12889 678 aa12.78□□□□□ -0.36
MRPL55-209ENST00000366735 ILKQ13418 452 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms