RNA–Protein interactions for RNA: ENST00000365040.1

RNU1-140P-201, Transcript of RNA, U1 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU1-140P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-140P-201ENST00000365040 MTF2Q9Y483 593 aaPredicted RBP3.38□□□□□ -1.87
RNU1-140P-201ENST00000365040 CFAP20Q9Y6A4 193 aaKnown RBP3.38□□□□□ -1.87
RNU1-140P-201ENST00000365040 ITPR1Q14643 2758 aa3.38□□□□□ -1.87
RNU1-140P-201ENST00000365040 LOC400499M0QZD8 3231 aa3.38□□□□□ -1.87
RNU1-140P-201ENST00000365040 CITO14578 2027 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 NOTCH4Q99466 2003 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 TNRC6BQ9UPQ9 1833 aaKnown RBP3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 FREM2Q5SZK8 3169 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 ANK1P16157 1881 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 MYO16Q9Y6X6 1858 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 COL4A3Q01955 1670 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 CHD8Q9HCK8 2581 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 HELZP42694 1942 aaKnown RBP3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 MYBPHLA2RUH7 354 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 INO80B-WBP1J3KQ70 363 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 SYN3O14994 580 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 MSH4O15457 936 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 CCL16O15467 120 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 TEX33O43247 280 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 SLC26A4O43511 780 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 CHMP2AO43633 222 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 TSPAN6O43657 245 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 MARCH6O60337 910 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 B4GALT3O60512 393 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 TSPAN1O60635 241 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 PRAMEF4O60810 478 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 TRIM13O60858 407 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 PSMD10O75832 226 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 SCGB1D2O95969 90 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 SPATA31D3P0C874 917 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 ZNF888P0CJ79 500 aaPredicted RBP3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 ZSCAN22P10073 491 aaPredicted RBP3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 CHRNB1P11230 501 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 XBP1P17861 261 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 CD72P21854 359 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 PAX3P23760 479 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 GDI1P31150 447 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 HOXA11P31270 313 aaPredicted RBP3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 HOXD12P35452 270 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 RRADP55042 308 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 PTENP60484 403 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 CDK17Q00537 523 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 SATB1Q01826 763 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 HGFACQ04756 655 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 FCHO2Q0JRZ9 810 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 LAMTOR4Q0VGL1 99 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 GRSF1Q12849 480 aaKnown RBP eCLIP3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 PPP2R5CQ13362 524 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 GTF2H3Q13889 308 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 EMC2Q15006 297 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 PCBP2Q15366 365 aaKnown RBP eCLIP3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 LPAL2Q16609 132 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 UGCGQ16739 394 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 ARHGAP15Q53QZ3 475 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 TTC22Q5TAA0 569 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 FAM171A1Q5VUB5 890 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 SLC8B1Q6J4K2 584 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 TSSK4Q6SA08 328 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 SPATA31D4Q6ZUB0 917 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 LARP4Q71RC2 724 aaKnown RBP eCLIP3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 ITIH5Q86UX2 942 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 CEP57Q86XR8 500 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 MFSD6LQ8IWD5 586 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 ZBTB8OSQ8IWT0 167 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 C4orf19Q8IY42 314 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 GPR156Q8NFN8 814 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 ZNF461Q8TAF7 563 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 LNX1Q8TBB1 728 aaPredicted RBP3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 PRPF31Q8WWY3 499 aaKnown RBP3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 CASKIN2Q8WXE0 1202 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 HDAC10Q969S8 669 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 LENG9Q96B70 501 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 CYFIP2Q96F07 1278 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 PGBD1Q96JS3 809 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 CEP170P1Q96L14 293 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 ZNF512Q96ME7 567 aaPredicted RBP3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 FAM20AQ96MK3 541 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 KCNC2Q96PR1 638 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 GCNAQ96QF7 691 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 GAD1Q99259 594 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 RNF26Q9BY78 433 aaPredicted RBP3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 UNC45AQ9H3U1 944 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 SLITRK6Q9H5Y7 841 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 KIF9Q9HAQ2 790 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 LMAN1LQ9HAT1 526 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 BCO1Q9HAY6 547 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 GOLGA2P5Q9HBQ8 144 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 TMEM9BQ9NQ34 198 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 ZIM2Q9NZV7 527 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 HSFX1Q9UBD0 423 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 OAZ3Q9UMX2 235 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 SLC8A2Q9UPR5 921 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 ZDHHC9Q9Y397 364 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 RBM8AQ9Y5S9 174 aaKnown RBP3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 DMXL2Q8TDJ6 3036 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 OBSL1O75147 1896 aa3.37□□□□□ -1.87
RNU1-140P-201ENST00000365040 DENND4CQ5VZ89 1909 aa3.36□□□□□ -1.87
RNU1-140P-201ENST00000365040 ZNF638Q14966 1978 aaKnown RBP3.36□□□□□ -1.87
RNU1-140P-201ENST00000365040 TSC2P49815 1807 aa3.36□□□□□ -1.87
RNU1-140P-201ENST00000365040 CYP3A7-CYP3A51PA0A087WV96 503 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms