RNA–Protein interactions for RNA: ENST00000359984.12

CLN3-205, Transcript of CLN3, battenin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-205ENST00000359984 ZNF33AQ06730 810 aa20.37■□□□□ 0.85
CLN3-205ENST00000359984 WASHC5Q12768 1159 aa20.37■□□□□ 0.85
CLN3-205ENST00000359984 C6orf118Q5T5N4 469 aa20.37■□□□□ 0.85
CLN3-205ENST00000359984 CXorf57Q6NSI4 855 aaKnown RBP20.37■□□□□ 0.85
CLN3-205ENST00000359984 SETD3Q86TU7 594 aaPredicted RBP20.37■□□□□ 0.85
CLN3-205ENST00000359984 CCDC13Q8IYE1 715 aa20.37■□□□□ 0.85
CLN3-205ENST00000359984 CARNMT1Q8N4J0 409 aa20.37■□□□□ 0.85
CLN3-205ENST00000359984 KIAA1958Q8N8K9 716 aa20.37■□□□□ 0.85
CLN3-205ENST00000359984 ST13P5Q8NFI4 369 aaPredicted RBP20.37■□□□□ 0.85
CLN3-205ENST00000359984 CCHCR1Q8TD31 782 aa20.37■□□□□ 0.85
CLN3-205ENST00000359984 IFT81Q8WYA0 676 aa20.37■□□□□ 0.85
CLN3-205ENST00000359984 OTUB2Q96DC9 234 aa20.37■□□□□ 0.85
CLN3-205ENST00000359984 CDX2Q99626 313 aaPredicted RBP20.37■□□□□ 0.85
CLN3-205ENST00000359984 PLK2Q9NYY3 685 aa20.37■□□□□ 0.85
CLN3-205ENST00000359984 IPO11Q9UI26 975 aaKnown RBP20.37■□□□□ 0.85
CLN3-205ENST00000359984 CD207Q9UJ71 328 aa20.37■□□□□ 0.85
CLN3-205ENST00000359984 A0A0D9SEW6 157 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 ILVBLA1L0T0 632 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 C5orf60A6NFR6 353 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 HEPACAM2A8MVW5 462 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 KCNK1O00180 336 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 SLC9A3R1O14745 358 aaPredicted RBP20.36■□□□□ 0.85
CLN3-205ENST00000359984 LUC7L3O95232 432 aaKnown RBP20.36■□□□□ 0.85
CLN3-205ENST00000359984 TUBBP07437 444 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 GNA12Q03113 381 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 GPS1Q13098 491 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 FSCBQ5H9T9 825 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 FYB2Q5VWT5 728 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 TANGO2Q6ICL3 276 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 CCNI2Q6ZMN8 369 aaPredicted RBP20.36■□□□□ 0.85
CLN3-205ENST00000359984 ADGRG2Q8IZP9 1017 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 CCDC110Q8TBZ0 833 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 BPIFB1Q8TDL5 484 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 ARHGEF2Q92974 986 aaKnown RBP20.36■□□□□ 0.85
CLN3-205ENST00000359984 MAGEH1Q9H213 219 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 OBP2AQ9NY56 170 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 GRHL1Q9NZI5 618 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 SEPT10Q9P0V9 454 aa20.36■□□□□ 0.85
CLN3-205ENST00000359984 H0Y626 953 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 H3BQ06 376 aaPredicted RBP20.35■□□□□ 0.85
CLN3-205ENST00000359984 RNF103O00237 685 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 GCATO75600 419 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 CYBBP04839 570 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 RHOCP08134 193 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 GBP2P32456 591 aaPredicted RBP20.35■□□□□ 0.85
CLN3-205ENST00000359984 CLCN6P51797 869 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 SERINC3Q13530 473 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 P3H1Q32P28 736 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 RNF43Q68DV7 783 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 OR7D4Q8NG98 312 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 WFDC5Q8TCV5 224 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 SUSD6Q92537 303 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 IRF7Q92985 503 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 ZFP14Q9HCL3 533 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 SPHK2Q9NRA0 654 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 FAM114A2Q9NRY5 505 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 USP15Q9Y4E8 981 aaPredicted RBP20.35■□□□□ 0.85
CLN3-205ENST00000359984 MTSS1O43312 755 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 MYBL2P10244 700 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 MCM3P25205 808 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 TNFRSF8P28908 595 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 CCDC85BQ15834 202 aaPredicted RBP20.35■□□□□ 0.85
CLN3-205ENST00000359984 RNF219Q5W0B1 726 aaPredicted RBP20.35■□□□□ 0.85
CLN3-205ENST00000359984 OSCP1Q8WVF1 389 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 NECTIN4Q96NY8 510 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 FERMT1Q9BQL6 677 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 CEP41Q9BYV8 373 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 DUS2Q9NX74 493 aaKnown RBP20.35■□□□□ 0.85
CLN3-205ENST00000359984 CLEC4EQ9ULY5 219 aa20.35■□□□□ 0.85
CLN3-205ENST00000359984 J3KR12 359 aa20.34■□□□□ 0.85
CLN3-205ENST00000359984 ZNF189O75820 626 aaPredicted RBP20.34■□□□□ 0.85
CLN3-205ENST00000359984 PENKP01210 267 aaPredicted RBP20.34■□□□□ 0.85
CLN3-205ENST00000359984 LAMP2P13473 410 aa20.34■□□□□ 0.85
CLN3-205ENST00000359984 PTPN3P26045 913 aa20.34■□□□□ 0.85
CLN3-205ENST00000359984 CUL1Q13616 776 aa20.34■□□□□ 0.85
CLN3-205ENST00000359984 CDH18Q13634 790 aa20.34■□□□□ 0.85
CLN3-205ENST00000359984 ANKRD20A2Q5SQ80 823 aa20.34■□□□□ 0.85
CLN3-205ENST00000359984 LY6G5CQ5SRR4 150 aa20.34■□□□□ 0.85
CLN3-205ENST00000359984 ANKRD20A1Q5TYW2 823 aa20.34■□□□□ 0.85
CLN3-205ENST00000359984 ANKRD20A3Q5VUR7 823 aa20.34■□□□□ 0.85
CLN3-205ENST00000359984 RHBDF2Q6PJF5 856 aa20.34■□□□□ 0.85
CLN3-205ENST00000359984 ZNF354CQ86Y25 554 aa20.34■□□□□ 0.85
CLN3-205ENST00000359984 MFN1Q8IWA4 741 aa20.34■□□□□ 0.85
CLN3-205ENST00000359984 SNF8Q96H20 258 aa20.34■□□□□ 0.85
CLN3-205ENST00000359984 PAK5Q9P286 719 aa20.34■□□□□ 0.85
CLN3-205ENST00000359984 NYNRINQ9P2P1 1898 aaKnown RBP20.34■□□□□ 0.85
CLN3-205ENST00000359984 BRWD1Q9NSI6 2320 aa20.33■□□□□ 0.85
CLN3-205ENST00000359984 C5orf42Q9H799 3197 aa20.33■□□□□ 0.85
CLN3-205ENST00000359984 A0A0A0MRY4 1105 aa20.33■□□□□ 0.85
CLN3-205ENST00000359984 MATN3O15232 486 aa20.33■□□□□ 0.85
CLN3-205ENST00000359984 STK10O94804 968 aaKnown RBP20.33■□□□□ 0.85
CLN3-205ENST00000359984 SEC31AO94979 1220 aaKnown RBP20.33■□□□□ 0.85
CLN3-205ENST00000359984 PEX11BO96011 259 aa20.33■□□□□ 0.85
CLN3-205ENST00000359984 ACTN2P35609 894 aa20.33■□□□□ 0.85
CLN3-205ENST00000359984 NUMBP49757 651 aa20.33■□□□□ 0.85
CLN3-205ENST00000359984 ZBTB17Q13105 803 aa20.33■□□□□ 0.85
CLN3-205ENST00000359984 TIGD7Q6NT04 549 aaPredicted RBP20.33■□□□□ 0.85
CLN3-205ENST00000359984 GPR153Q6NV75 609 aa20.33■□□□□ 0.85
CLN3-205ENST00000359984 ZNF567Q8N184 647 aa20.33■□□□□ 0.85
CLN3-205ENST00000359984 TAB3Q8N5C8 712 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms