RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 METTL7BQ6UX53 244 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 SAMD7Q7Z3H4 446 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 PTAR1Q7Z6K3 402 aaPredicted RBP11.11□□□□□ -0.63
RPE-202ENST00000359429 FAM131BQ86XD5 332 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 ZNF567Q8N184 647 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 TMEM151AQ8N4L1 468 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 C7orf31Q8N865 590 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 ADCY4Q8NFM4 1077 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 CENPIQ92674 756 aaPredicted RBP11.11□□□□□ -0.63
RPE-202ENST00000359429 TMIGD2Q96BF3 282 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 CNDP1Q96KN2 507 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 ZFRQ96KR1 1074 aaKnown RBP11.11□□□□□ -0.63
RPE-202ENST00000359429 Q9H521 79 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 LIN28AQ9H9Z2 209 aaKnown RBP11.11□□□□□ -0.63
RPE-202ENST00000359429 PRDM16Q9HAZ2 1276 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 ZDHHC2Q9UIJ5 367 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 GOLGA8TH3BQL2 631 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 ACOT8O14734 319 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 STRNO43815 780 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 CAPNS1P04632 268 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 POLBP06746 335 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 ZFXP17010 805 aaPredicted RBP11.11□□□□□ -0.63
RPE-202ENST00000359429 ZNF26P17031 533 aaPredicted RBP11.11□□□□□ -0.63
RPE-202ENST00000359429 CDH2P19022 906 aaPredicted RBP11.11□□□□□ -0.63
RPE-202ENST00000359429 LIMK2P53671 638 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 HSP90AA5PQ58FG0 334 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 C16orf89Q6UX73 402 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 NIM1KQ8IY84 436 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 ZSCAN18Q8TBC5 510 aaPredicted RBP11.11□□□□□ -0.63
RPE-202ENST00000359429 NDRG1Q92597 394 aaKnown RBP11.11□□□□□ -0.63
RPE-202ENST00000359429 ZNF669Q96BR6 464 aaPredicted RBP11.11□□□□□ -0.63
RPE-202ENST00000359429 MFSD3Q96ES6 412 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 C12orf42Q96LP6 360 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 SERPINI1Q99574 410 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 GPR20Q99678 358 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 NPAS2Q99743 824 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 VPS33BQ9H267 617 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 DPEP3Q9H4B8 488 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 ZNF385DQ9H6B1 395 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 NMRAL1Q9HBL8 299 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 PLK2Q9NYY3 685 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 GTF2IRD1Q9UHL9 959 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 RNF11Q9Y3C5 154 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 MYO18AQ92614 2054 aaKnown RBP11.1□□□□□ -0.63
RPE-202ENST00000359429 ZCWPW2A0A1B0GU75 182 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 BTBD19C9JJ37 291 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 KCNK1O00180 336 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 HDAC3O15379 428 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 CCDC130P13994 396 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 PITX1P78337 314 aaPredicted RBP11.1□□□□□ -0.63
RPE-202ENST00000359429 CREB5Q02930 508 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 NAB1Q13506 487 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 TMEM132DQ14C87 1099 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 AMHR2Q16671 573 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 ARL13AQ5H913 290 aaPredicted RBP11.1□□□□□ -0.63
RPE-202ENST00000359429 IL23RQ5VWK5 629 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 RP9Q8TA86 221 aaKnown RBP11.1□□□□□ -0.63
RPE-202ENST00000359429 URGCPQ8TCY9 931 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 ATP6V1E2Q96A05 226 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 ILKAPQ9H0C8 392 aaPredicted RBP11.1□□□□□ -0.63
RPE-202ENST00000359429 PDZD7Q9H5P4 517 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 WDR41Q9HAD4 459 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 OXSMQ9NWU1 459 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 DPP3Q9NY33 737 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 PHIPQ8WWQ0 1821 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 TMEM114B3SHH9 223 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 MAGEB3O15480 346 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 PFDN1O60925 122 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 BCAS2O75934 225 aaPredicted RBP11.1□□□□□ -0.63
RPE-202ENST00000359429 PIGNO95427 931 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 LCP1P13796 627 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 ARSAP15289 507 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 TFEBP19484 476 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 GARSP41250 739 aaKnown RBP11.1□□□□□ -0.63
RPE-202ENST00000359429 PTPN9P43378 593 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 SERPINB8P50452 374 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 GALK1P51570 392 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 NSUN2Q08J23 767 aaKnown RBP eCLIP11.1□□□□□ -0.63
RPE-202ENST00000359429 TNFAIP1Q13829 316 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 CYTH1Q15438 398 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 EML3Q32P44 896 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 SPNS2Q8IVW8 549 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 PGAM4Q8N0Y7 254 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 NUP93Q8N1F7 819 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 CCNYQ8ND76 341 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 RIN3Q8TB24 985 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 PDCD6IPQ8WUM4 868 aaKnown RBP11.1□□□□□ -0.63
RPE-202ENST00000359429 TMA16Q96EY4 203 aaKnown RBP11.1□□□□□ -0.63
RPE-202ENST00000359429 SEMA6AQ9H2E6 1030 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 PRDM12Q9H4Q4 367 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 EIF2B3Q9NR50 452 aaKnown RBP11.1□□□□□ -0.63
RPE-202ENST00000359429 RNF19AQ9NV58 838 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 HACL1Q9UJ83 578 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 VPS28Q9UK41 221 aa11.1□□□□□ -0.63
RPE-202ENST00000359429 TCAF2A6NFQ2 919 aa11.09□□□□□ -0.63
RPE-202ENST00000359429 TMEM233B4DJY2 109 aa11.09□□□□□ -0.63
RPE-202ENST00000359429 TRMUO75648 421 aaKnown RBP11.09□□□□□ -0.63
RPE-202ENST00000359429 ME2P23368 584 aa11.09□□□□□ -0.63
RPE-202ENST00000359429 EDNRBP24530 442 aa11.09□□□□□ -0.63
RPE-202ENST00000359429 SPRP35270 261 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms