RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 URODP06132 367 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 TMIGD3P0DMS9 266 aaPredicted RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 ACADMP11310 421 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 OSMP13725 252 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 KRT6CP48668 564 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 SNX16P57768 344 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 SLMAPQ14BN4 828 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 NFKBIBQ15653 356 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 CMPK2Q5EBM0 449 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 CXorf66Q5JRM2 361 aaPredicted RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 ZAR1Q86SH2 424 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 SYT12Q8IV01 421 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 CCDC28AQ8IWP9 274 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 CCDC105Q8IYK2 499 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 RNF168Q8IYW5 571 aaPredicted RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 FSTL5Q8N475 847 aaPredicted RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 PIK3C3Q8NEB9 887 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 SCLT1Q96NL6 688 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 UBL7Q96S82 380 aaPredicted RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 SLC25A23Q9BV35 468 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 CHST7Q9NS84 486 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 DNAJC11Q9NVH1 559 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 PSD3Q9NYI0 1048 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 ATP10DQ9P241 1426 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 ADAMTS6Q9UKP5 1117 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 GRID1Q9ULK0 1009 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 FZD4Q9ULV1 537 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 ZDHHC9Q9Y397 364 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 KLF2Q9Y5W3 355 aaPredicted RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 DNAH3Q8TD57 4116 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 IL16Q14005 1332 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 PITPNM2Q9BZ72 1349 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 CCDC196A0A1B0GTZ2 297 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 MUSKO15146 869 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 KLHL41O60662 606 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 LY86O95711 162 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 TYMPP19971 482 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 HNF4AP41235 474 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 VIPR2P41587 438 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 SLC6A3Q01959 620 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 EEF1DP3Q658K8 133 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 MCTP2Q6DN12 878 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 TMEM214Q6NUQ4 689 aaKnown RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 ERO1BQ86YB8 467 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 IQCF2Q8IXL9 164 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 ZNF595Q8IYB9 648 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 PHACTR4Q8IZ21 702 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 LSMEM2Q8N112 164 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 C3orf20Q8ND61 904 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 OR2T3Q8NH03 318 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 BBS10Q8TAM1 723 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 PIWIL2Q8TC59 973 aaKnown RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 RGMAQ96B86 450 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 ZNF845Q96IR2 970 aaPredicted RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 VPS50Q96JG6 964 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 CCDC94Q9BW85 323 aaPredicted RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 XRN2Q9H0D6 950 aaKnown RBP eCLIP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 INTS2Q9H0H0 1204 aaKnown RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 EPC1Q9H2F5 836 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 UNKLQ9H9P5 680 aaKnown RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 IL19Q9UHD0 177 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 MTMR6Q9Y217 621 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 CPAMD8Q8IZJ3 1885 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 COL2A1P02458 1487 aaPredicted RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 LNP1A1A4G5 178 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 CYP27B1O15528 508 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 WFS1O76024 890 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 PRSS23O95084 383 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 CER1O95813 267 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 PDGFBP01127 241 aaPredicted RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 LPLP06858 475 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 NBPF7P0C2Y1 421 aaPredicted RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 FAHP16930 419 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 PRKCAP17252 672 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 PTPN1P18031 435 aaKnown RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 THBS4P35443 961 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 MAGEA8P43361 318 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 OR1G1P47890 313 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 CLCN4P51793 760 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 HMGN5P82970 282 aaKnown RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 BEX3Q00994 111 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 AMPD2Q01433 879 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 OCRLQ01968 901 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 CCDC15Q0P6D6 951 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 PDE1CQ14123 709 aaPredicted RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 SLC44A4Q53GD3 710 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 COLEC12Q5KU26 742 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 PGBD2Q6P3X8 592 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 OTOAQ7RTW8 1153 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 GPR149Q86SP6 731 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 MYLK4Q86YV6 388 aaPredicted RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 CPSF7Q8N684 471 aaKnown RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 PI4KAP1Q8N8J0 262 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 FAM162AQ96A26 154 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 TCTN2Q96GX1 697 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 PGAM5Q96HS1 289 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 MRPL37Q9BZE1 423 aaKnown RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 MROH8Q9H579 483 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 OPA3Q9H6K4 179 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 FAM212BQ9NTI7 297 aaPredicted RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms