RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 ENTPD7Q9NQZ7 604 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 COMMD8Q9NX08 183 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 CLIC5Q9NZA1 410 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.95□□□□□ -0.18
VCP-201ENST00000358901 RIMS1Q86UR5 1692 aaKnown RBP13.95□□□□□ -0.18
VCP-201ENST00000358901 DLGAP3O95886 979 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 CYP1A1P04798 512 aaPredicted RBP13.95□□□□□ -0.18
VCP-201ENST00000358901 CCDC166P0CW27 439 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 HIRAP54198 1017 aaPredicted RBP13.95□□□□□ -0.18
VCP-201ENST00000358901 HIST2H2ACQ16777 129 aaPredicted RBP13.95□□□□□ -0.18
VCP-201ENST00000358901 CELF3Q5SZQ8 465 aaKnown RBP13.95□□□□□ -0.18
VCP-201ENST00000358901 GJC2Q5T442 439 aaPredicted RBP13.95□□□□□ -0.18
VCP-201ENST00000358901 HIST2H2AA3Q6FI13 130 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 ZNF280DQ6N043 979 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 RNF180Q86T96 592 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 CPXM1Q96SM3 734 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 ALG9Q9H6U8 611 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 LIMD1Q9UGP4 676 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 PCDHA11Q9Y5I1 949 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 PPP2R3BQ9Y5P8 575 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 SNCAIPQ9Y6H5 919 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 SPATA31C2B4DYI2 1134 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 PTGES3LE9PB15 166 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 BTN3A1O00481 513 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 CST3P01034 146 aaPredicted RBP13.95□□□□□ -0.18
VCP-201ENST00000358901 GRIA4P48058 902 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 USP4Q13107 963 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 MSLNQ13421 630 aaPredicted RBP13.95□□□□□ -0.18
VCP-201ENST00000358901 BNIPLQ7Z465 357 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 DHDDSQ86SQ9 333 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 ZNF384Q8TF68 577 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 SERPINB11Q96P15 392 aa13.95□□□□□ -0.18
VCP-201ENST00000358901 H2AFY2Q9P0M6 372 aaPredicted RBP13.95□□□□□ -0.18
VCP-201ENST00000358901 ARIH2O95376 493 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 BCL10O95999 233 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 NPR3P17342 541 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 PSMB9P28065 219 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 BNIP1Q12981 228 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 CDC16Q13042 620 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 FAM9CQ8IZT9 166 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 STX19Q8N4C7 294 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 BSNDQ8WZ55 320 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 ATP13A1Q9HD20 1204 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 CYLDQ9NQC7 956 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 TUBGCP4Q9UGJ1 667 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 CASZ1Q86V15 1759 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 ATP6AP2A0A1C7CYW4 349 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 GNG14A0A1W2PPG7 69 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 MGAT4DA6NG13 374 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 YDJCA8MPS7 323 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 ATP6AP2O75787 350 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 KRT6AP02538 564 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 KRT6BP04259 564 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 GSTT1P30711 240 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 KRT6CP48668 564 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 PFKFB4Q16877 469 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 PCID2Q5JVF3 399 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 TRIM69Q86WT6 500 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 SLC41A1Q8IVJ1 513 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 ANKRD52Q8NB46 1076 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 GSTCDQ8NEC7 633 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 KCTD4Q8WVF5 259 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 SMPD4Q9NXE4 827 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 CCDC154A6NI56 674 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 SERPINA6P08185 405 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 CRY2Q49AN0 593 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 LACTB2Q53H82 288 aaPredicted RBP13.94□□□□□ -0.18
VCP-201ENST00000358901 PRMT9Q6P2P2 845 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 FBXW8Q8N3Y1 598 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 DLG3Q92796 817 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 FBXO44Q9H4M3 255 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 UMODL1Q5DID0 1318 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 RGSL1A5PLK6 1076 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 C2orf71A6NGG8 1288 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 ADM5C9JUS6 153 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 PDHXO00330 501 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 LRCH4O75427 683 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 NPM3O75607 178 aaKnown RBP13.94□□□□□ -0.18
VCP-201ENST00000358901 TSPAN8P19075 237 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 GRIA3P42263 894 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 SERPINH1P50454 418 aaKnown RBP13.94□□□□□ -0.18
VCP-201ENST00000358901 ASTE1Q2TB18 679 aaPredicted RBP13.94□□□□□ -0.18
VCP-201ENST00000358901 TBC1D19Q8N5T2 526 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 CASP10Q92851 521 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 TLCD1Q96CP7 247 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 B3GNT5Q9BYG0 378 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 ELOVL4Q9GZR5 314 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 TMEM245Q9H330 911 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 BCAS3Q9H6U6 928 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 PCDH18Q9HCL0 1135 aa13.94□□□□□ -0.18
VCP-201ENST00000358901 CAMTA1Q9Y6Y1 1673 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 NID2Q14112 1375 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 NKRFO15226 690 aaKnown RBP eCLIP13.93□□□□□ -0.18
VCP-201ENST00000358901 GSC2O15499 205 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 HSMCR30P0CW71 290 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 MAPK1P28482 360 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 WASHC5Q12768 1159 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 C10orf107Q8IVU9 208 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 KLHL25Q9H0H3 589 aa13.93□□□□□ -0.18
VCP-201ENST00000358901 PNPOQ9NVS9 261 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms