RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 BATF3Q9NR55 127 aa14.64□□□□□ -0.07
NIPAL3-203ENST00000358028 KCNK4Q9NYG8 393 aa14.64□□□□□ -0.07
NIPAL3-203ENST00000358028 SEPT10Q9P0V9 454 aa14.64□□□□□ -0.07
NIPAL3-203ENST00000358028 HEY2Q9UBP5 337 aa14.64□□□□□ -0.07
NIPAL3-203ENST00000358028 DCTN4Q9UJW0 460 aa14.64□□□□□ -0.07
NIPAL3-203ENST00000358028 LRFN2Q9ULH4 789 aa14.64□□□□□ -0.07
NIPAL3-203ENST00000358028 A0A0G2JND7 137 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 CASTOR2A6NHX0 329 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 HHLA1C9JL84 531 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 RFPL1O75677 317 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 CBX6O95503 412 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 BGNP21810 368 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 CACNA2D1P54289 1103 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 WASHC5Q12768 1159 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 OVGP1Q12889 678 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 BMPR2Q13873 1038 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 GRIN2CQ14957 1233 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 PDCD7Q8N8D1 485 aaKnown RBP14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 CCNYQ8ND76 341 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 SP7Q8TDD2 431 aaPredicted RBP14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 DEPDC1BQ8WUY9 529 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 ZNF689Q96CS4 500 aaPredicted RBP14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 PTCD3Q96EY7 689 aaKnown RBP14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 KCNK16Q96T55 309 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 TMEM120AQ9BXJ8 343 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 PRDM12Q9H4Q4 367 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 CXorf56Q9H5V9 222 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 ZNF576Q9H609 170 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 SLC28A3Q9HAS3 691 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 KCNK13Q9HB14 408 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 WDR6Q9NNW5 1121 aaKnown RBP14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 TMEM161AQ9NX61 479 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 SIRPGQ9P1W8 387 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 PCDHB7Q9Y5E2 793 aa14.63□□□□□ -0.07
NIPAL3-203ENST00000358028 WDR27A2RRH5 827 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 LINC01553A4QN01 128 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 SDR42E2A6NKP2 422 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 FAM72CH0Y354 149 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 LTFP02788 710 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 USP17L7P0C7H9 530 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 CALB2P22676 271 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 PSMB4P28070 264 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 PCSK1P29120 753 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 CRHR1P34998 444 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 ZBTB16Q05516 673 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 SEMA3BQ13214 749 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 PAN2Q504Q3 1202 aaKnown RBP14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 TIGD5Q53EQ6 642 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 FAM72AQ5TYM5 149 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 FAM72DQ6L9T8 149 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 PDZD4Q76G19 769 aaPredicted RBP14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 ZNF598Q86UK7 904 aaKnown RBP14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 FAM72BQ86X60 149 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 ZNF567Q8N184 647 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 MAB21L3Q8N8X9 362 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 ADAM32Q8TC27 787 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 ACMSDQ8TDX5 336 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 PGAP3Q96FM1 320 aaPredicted RBP14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 SMARCD1Q96GM5 515 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 OXNAD1Q96HP4 312 aaPredicted RBP14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 BTBD10Q9BSF8 475 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 ELAC1Q9H777 363 aaKnown RBP14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 ANLNQ9NQW6 1124 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 TMEM30AQ9NV96 361 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 RRN3Q9NYV6 651 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 MOCS1Q9NZB8 636 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 IGSF9Q9P2J2 1179 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 FBXW11Q9UKB1 542 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 RAD54BQ9Y620 910 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 PLXNA4Q9HCM2 1894 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 PEX11AO75192 247 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 ALDH1A2O94788 518 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 ODC1P11926 461 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 NCAM1P13591 858 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 ERCC2P18074 760 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 HCAR3P49019 387 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 TPI1P60174 286 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 IFRD2Q12894 506 aaPredicted RBP14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 UPP1Q16831 310 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 CDHR3Q6ZTQ4 885 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 MARK2Q7KZI7 788 aaKnown RBP14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 BHLHA9Q7RTU4 235 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 MYLPFQ96A32 169 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 PAAF1Q9BRP4 392 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 NAT9Q9BTE0 207 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 CEP41Q9BYV8 373 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 MMADHCQ9H3L0 296 aaPredicted RBP14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 CERS4Q9HA82 394 aa14.62□□□□□ -0.07
NIPAL3-203ENST00000358028 DIAPH2O60879 1101 aa14.61□□□□□ -0.07
NIPAL3-203ENST00000358028 PGAM1P18669 254 aa14.61□□□□□ -0.07
NIPAL3-203ENST00000358028 GNAZP19086 355 aa14.61□□□□□ -0.07
NIPAL3-203ENST00000358028 MGAT1P26572 445 aa14.61□□□□□ -0.07
NIPAL3-203ENST00000358028 EPHB2P29323 1055 aa14.61□□□□□ -0.07
NIPAL3-203ENST00000358028 RAB27AP51159 221 aa14.61□□□□□ -0.07
NIPAL3-203ENST00000358028 ARL13BQ3SXY8 428 aa14.61□□□□□ -0.07
NIPAL3-203ENST00000358028 CLLU1OSQ5K130 101 aa14.61□□□□□ -0.07
NIPAL3-203ENST00000358028 CASC4Q6P4E1 433 aa14.61□□□□□ -0.07
NIPAL3-203ENST00000358028 KYAT3Q6YP21 454 aaKnown RBP14.61□□□□□ -0.07
NIPAL3-203ENST00000358028 METTL23Q86XA0 190 aa14.61□□□□□ -0.07
NIPAL3-203ENST00000358028 TP53INP2Q8IXH6 220 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms