RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 UGT2B11O75310 529 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 ABCB1P08183 1280 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 ATXN3P54252 364 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 DYNLL1P63167 89 aaKnown RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 TP53BP2Q13625 1128 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 NEK5Q6P3R8 708 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 HHIPL2Q6UWX4 724 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 AGR3Q8TD06 166 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 HSPH1Q92598 858 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 IFT43Q96FT9 208 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 TRHDEQ9UKU6 1024 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 CACNA1SQ13698 1873 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 NEMP1O14524 444 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 KCNN4O15554 427 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 MPZL2O60487 215 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 TRIM3O75382 744 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 FBXO21O94952 628 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 HTR7P34969 479 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 MXD4Q14582 209 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 MYLK3Q32MK0 819 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 UGT2A3Q6UWM9 527 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 DCDC5Q6ZRR9 648 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 TREML1Q86YW5 311 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 TFB1MQ8WVM0 346 aaKnown RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 KLHL11Q9NVR0 708 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 POLG2Q9UHN1 485 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 ARFGEF1Q9Y6D6 1849 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 RECQL5O94762 991 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 APRTP07741 180 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 GRAPQ13588 217 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 QRICH1Q2TAL8 776 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 GRAPLQ8TC17 118 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 LPAR1Q92633 364 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 ATP6V1E2Q96A05 226 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 C17orf80Q9BSJ5 609 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 PTTG3PQ9NZH4 202 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 CFL2Q9Y281 166 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 MYO10Q9HD67 2058 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 PTPRJQ12913 1337 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 TEX28O15482 410 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 ANXA9O76027 345 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 CFBP00751 764 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 PIM1P11309 404 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 ELK3P41970 407 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 INHBCP55103 352 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 TKFCQ3LXA3 575 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 LIPMQ5VYY2 423 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 MZT2BQ6NZ67 158 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 AADACL2Q6P093 401 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 KIAA0408Q6ZU52 694 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 WDR49Q8IV35 697 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 MICU2Q8IYU8 434 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 CHPT1Q8WUD6 406 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 PNMA5Q96PV4 448 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 KCTD14Q9BQ13 255 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 RTFDC1Q9BY42 306 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 COA1Q9GZY4 146 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 IPPQ9Y573 584 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 MTRF1O75570 445 aaKnown RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 C6orf222P0C671 652 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 PSME3P61289 254 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 SPIRE1Q08AE8 756 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 PICALMQ13492 652 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 TLR1Q15399 786 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 TIFABQ6ZNK6 161 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 SNX32Q86XE0 403 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 MIER2Q8N344 545 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 FAM71DQ8N9W8 422 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 IPCEF1Q8WWN9 437 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 ZNF347Q96SE7 839 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 LRRC4CQ9HCJ2 640 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 POMPQ9Y244 141 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 SBF2Q86WG5 1849 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 ZNF335Q9H4Z2 1342 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 SEC24AO95486 1093 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 NADKO95544 446 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 IFNA14P01570 189 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 CD40LGP29965 261 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 ALDH1B1P30837 517 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 RECQLP46063 649 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 TSNQ15631 228 aaKnown RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 SLC2A7Q6PXP3 512 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 TCAIMQ8N3R3 496 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 USP13Q92995 863 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 OTUB1Q96FW1 271 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 MRPL4Q9BYD3 311 aaKnown RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 USP29Q9HBJ7 922 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 TMEM260Q9NX78 707 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 SIRPGQ9P1W8 387 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 KLHL3Q9UH77 587 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 MTF2Q9Y483 593 aaPredicted RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 hCG_1818297A0A087WSY0 165 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 SLC37A4O43826 429 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 EIF2B5Q13144 721 aaKnown RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 RUNDC3AQ59EK9 446 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 ARSHQ5FYA8 562 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 SNRNP48Q6IEG0 339 aaKnown RBP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 THAP5Q7Z6K1 395 aa6.68□□□□□ -1.34
TRIM38-201ENST00000357085 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.68□□□□□ -1.34
TRIM38-201ENST00000357085 CACNA2D2Q9NY47 1150 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms