RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 LUC7L3O95232 432 aaKnown RBP4.13□□□□□ -1.75
LIG4-201ENST00000356922 EGFP01133 1207 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 ZSCAN5DPP0CG00 497 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 GKP32189 559 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 WASP42768 502 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 RGRP47804 291 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 IFNAR2P48551 515 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 SNX1Q13596 522 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 MICALCLQ6ZW33 695 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 KIAA0907Q7Z7F0 614 aaPredicted RBP4.13□□□□□ -1.75
LIG4-201ENST00000356922 SLC13A5Q86YT5 568 aaPredicted RBP4.13□□□□□ -1.75
LIG4-201ENST00000356922 MFN1Q8IWA4 741 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 YAF2Q8IY57 180 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 RCOR2Q8IZ40 523 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 TXLNBQ8N3L3 684 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 PGBD5Q8N414 524 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 PAF1Q8N7H5 531 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 CNTD1Q8N815 330 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 FIBINQ8TAL6 211 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 ACTL9Q8TC94 416 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 ARHGEF2Q92974 986 aaKnown RBP4.13□□□□□ -1.75
LIG4-201ENST00000356922 TBC1D31Q96DN5 1066 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 MRGPRX3Q96LB0 322 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 SMIM14Q96QK8 99 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 ZNF670Q9BS34 389 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 DCLK3Q9C098 648 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 KIF9Q9HAQ2 790 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 DNAJC17Q9NVM6 304 aaKnown RBP4.13□□□□□ -1.75
LIG4-201ENST00000356922 MARK1Q9P0L2 795 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 IGSF9Q9P2J2 1179 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 TBC1D14Q9P2M4 693 aa4.13□□□□□ -1.75
LIG4-201ENST00000356922 A0A0U1RQS6 177 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 RASA4BC9J798 803 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 DFFAO00273 331 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 RASA4O43374 803 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 ZNF500O60304 480 aaPredicted RBP4.12□□□□□ -1.75
LIG4-201ENST00000356922 SRFP11831 508 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 HLA-EP13747 358 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 RHOQP17081 205 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 KIR2DL1P43626 348 aaPredicted RBP4.12□□□□□ -1.75
LIG4-201ENST00000356922 HCAR3P49019 387 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 OTUD4Q01804 1114 aaKnown RBP4.12□□□□□ -1.75
LIG4-201ENST00000356922 SLC10A7Q0GE19 358 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 OLIG2Q13516 323 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 ITPRIPL2Q3MIP1 535 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 MPPE1Q53F39 396 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 C2orf27AQ580R0 203 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 DNTTIP2Q5QJE6 756 aaKnown RBP4.12□□□□□ -1.75
LIG4-201ENST00000356922 MTSS1LQ765P7 747 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 ZNF354CQ86Y25 554 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 RFX6Q8HWS3 928 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 PSTKQ8IV42 348 aaKnown RBP4.12□□□□□ -1.75
LIG4-201ENST00000356922 CCDC117Q8IWD4 279 aaPredicted RBP4.12□□□□□ -1.75
LIG4-201ENST00000356922 SYCE1Q8N0S2 351 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 SIX5Q8N196 739 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 UMODL1-AS1Q8N2C9 162 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 RASGEF1CQ8N431 466 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 TSEN2Q8NCE0 465 aaKnown RBP4.12□□□□□ -1.75
LIG4-201ENST00000356922 ATP2A3Q93084 1043 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 OLFM3Q96PB7 478 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 TMEM121Q9BTD3 319 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 SPON2Q9BUD6 331 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 ACE2Q9BYF1 805 aaPredicted RBP4.12□□□□□ -1.75
LIG4-201ENST00000356922 SLC6A17Q9H1V8 727 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 CARD9Q9H257 536 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 EPHX3Q9H6B9 360 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 USP29Q9HBJ7 922 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 CD93Q9NPY3 652 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 SLC12A6Q9UHW9 1150 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 DUSP12Q9UNI6 340 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 FAM50BQ9Y247 325 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 MUC6Q6W4X9 2439 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 ZFHX4Q86UP3 3567 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 A0A1B0GVM2 712 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 TCAF2A6NFQ2 919 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 WASH4PA8MWX3 477 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 CBX4O00257 560 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 DAPK3O43293 454 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 ADAM23O75077 832 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 KAT7O95251 611 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 TARSP26639 723 aaKnown RBP4.12□□□□□ -1.75
LIG4-201ENST00000356922 AIF1P55008 147 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 CDH4P55283 916 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 SEC13P55735 322 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 GNA12Q03113 381 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 ZBTB17Q13105 803 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 SERINC3Q13530 473 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 CCINQ13939 588 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 PAFAH1B3Q15102 231 aaKnown RBP4.12□□□□□ -1.75
LIG4-201ENST00000356922 PDK2Q15119 407 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 PLEKHG6Q3KR16 790 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 MPP7Q5T2T1 576 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 SYCP2LQ5T4T6 812 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 EGFLAMQ63HQ2 1017 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 KIAA1211LQ6NV74 962 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 LRRC31Q6UY01 552 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 BBS12Q6ZW61 710 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 TAB3Q8N5C8 712 aaPredicted RBP4.12□□□□□ -1.75
LIG4-201ENST00000356922 OR6K2Q8NGY2 324 aa4.12□□□□□ -1.75
LIG4-201ENST00000356922 FUBP1Q96AE4 644 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms