RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 MTCH2Q9Y6C9 303 aa18.59■□□□□ 0.57
SMARCD3-202ENST00000356800 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 RASA4BC9J798 803 aa18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 RASA4O43374 803 aa18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 USP4Q13107 963 aa18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 ADGRE1Q14246 886 aa18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 ZNF77Q15935 545 aa18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 SPDYCQ5MJ68 293 aa18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 RNASEH2BQ5TBB1 312 aaKnown RBP18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 CHST9Q7L1S5 443 aa18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 PCGF5Q86SE9 256 aa18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 NPAS3Q8IXF0 933 aa18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 CCDC13Q8IYE1 715 aa18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 CPXM2Q8N436 756 aa18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 ATPAF2Q8N5M1 289 aa18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 TSEN2Q8NCE0 465 aaKnown RBP18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 FOXP3Q9BZS1 431 aa18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 RETREG1Q9H6L5 497 aa18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 SEPT10Q9P0V9 454 aa18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 PAK5Q9P286 719 aa18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 TPX2Q9ULW0 747 aaKnown RBP18.58■□□□□ 0.57
SMARCD3-202ENST00000356800 C5orf42Q9H799 3197 aa18.58■□□□□ 0.56
SMARCD3-202ENST00000356800 DOCK8Q8NF50 2099 aa18.58■□□□□ 0.56
SMARCD3-202ENST00000356800 A0A0A0MRY4 1105 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 A0A1B0GVM2 712 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 TCAF2A6NFQ2 919 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 CLDN11O75508 207 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 FSHRP23945 695 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 CCNCP24863 283 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 PTPN3P26045 913 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 MLLT1Q03111 559 aaPredicted RBP18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 ZNF33AQ06730 810 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 DLX2Q07687 328 aaPredicted RBP18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 DHX9Q08211 1270 aaKnown RBP18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 ZBTB17Q13105 803 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 MORF4L2Q15014 288 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 ANKRD20A2Q5SQ80 823 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 ANKRD20A1Q5TYW2 823 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 TTC39BQ5VTQ0 682 aaPredicted RBP18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 ANKRD20A3Q5VUR7 823 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 C4orf22Q6V702 233 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 ZNF567Q8N184 647 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 CPT1BQ92523 772 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 SPATA13Q96N96 652 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 ACBD3Q9H3P7 528 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 FARP1Q9Y4F1 1045 aaPredicted RBP18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 TMEM265A0A087WTH1 108 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 RAMP2O60895 175 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 TBL1XO60907 577 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 TBX10O75333 385 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 METTL18O95568 372 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 TCF3P15923 654 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 ACVRL1P37023 503 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 SLMAPQ14BN4 828 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 POLD3Q15054 466 aaPredicted RBP18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 CTC1Q2NKJ3 1217 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 ANKRD22Q5VYY1 191 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 ALS2CLQ60I27 953 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 LRRC49Q8IUZ0 686 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 TDRD5Q8NAT2 981 aaKnown RBP18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 HJURPQ8NCD3 748 aaPredicted RBP18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 TMA16Q96EY4 203 aaKnown RBP18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 ZNF419Q96HQ0 510 aaPredicted RBP18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 LRRC3BQ96PB8 259 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 IPO11Q9UI26 975 aaKnown RBP18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 TBC1D30Q9Y2I9 924 aa18.57■□□□□ 0.56
SMARCD3-202ENST00000356800 A0A0D9SEW6 157 aa18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 ARHGAP42A6NI28 874 aa18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 SMAPO00193 183 aa18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 SOX1O00570 391 aaPredicted RBP18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 PEX11BO96011 259 aa18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 HOXB8P17481 243 aaPredicted RBP18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 WEE1P30291 646 aa18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 ACTN2P35609 894 aa18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 YBEYP58557 167 aaPredicted RBP18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 SERINC3Q13530 473 aa18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 PARP15Q460N3 678 aa18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 FAXCQ5TGI0 409 aa18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 CXorf57Q6NSI4 855 aaKnown RBP18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 IQCKQ8N0W5 287 aa18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 FGF13Q92913 245 aa18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 ARHGEF2Q92974 986 aaKnown RBP18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 RSPRY1Q96DX4 576 aa18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 S1PR5Q9H228 398 aa18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 SHOC2Q9UQ13 582 aa18.56■□□□□ 0.56
SMARCD3-202ENST00000356800 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 TCRBV7S3A2A0A539 114 aa18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 J3KR12 359 aa18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 MTSS1O43312 755 aa18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 OPHN1O60890 802 aa18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 CHKAP35790 457 aa18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 GNA12Q03113 381 aa18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 ZNF177Q13360 481 aaPredicted RBP18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 GET4Q7L5D6 327 aaPredicted RBP18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 HOOK3Q86VS8 718 aa18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 ZCCHC9Q8N567 271 aaKnown RBP18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 NAT8LQ8N9F0 302 aa18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 OR7D4Q8NG98 312 aa18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 PRCCQ92733 491 aaPredicted RBP18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 BHMTQ93088 406 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms