RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 UGGT1Q9NYU2 1555 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 BTN3A2P78410 334 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 SLC47A2Q86VL8 602 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 THAP2Q9H0W7 228 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 TOP3BO95985 862 aaKnown RBP17.52■□□□□ 0.39
COL27A1-201ENST00000356083 CLPTM1O96005 669 aa17.52■□□□□ 0.39
COL27A1-201ENST00000356083 BMP7P18075 431 aa17.52■□□□□ 0.39
COL27A1-201ENST00000356083 SLC1A6P48664 564 aa17.52■□□□□ 0.39
COL27A1-201ENST00000356083 HSPA13P48723 471 aa17.52■□□□□ 0.39
COL27A1-201ENST00000356083 DEFB107AQ8IZN7 70 aa17.52■□□□□ 0.39
COL27A1-201ENST00000356083 HIC2Q96JB3 615 aa17.52■□□□□ 0.39
COL27A1-201ENST00000356083 ZFP14Q9HCL3 533 aa17.52■□□□□ 0.39
COL27A1-201ENST00000356083 PTGFRNQ9P2B2 879 aa17.52■□□□□ 0.39
COL27A1-201ENST00000356083 WRBO00258 174 aa17.52■□□□□ 0.39
COL27A1-201ENST00000356083 MATN4O95460 622 aa17.52■□□□□ 0.39
COL27A1-201ENST00000356083 TTC7BQ86TV6 843 aa17.52■□□□□ 0.39
COL27A1-201ENST00000356083 SCUBE3Q8IX30 993 aa17.52■□□□□ 0.39
COL27A1-201ENST00000356083 TM6SF2Q9BZW4 377 aa17.52■□□□□ 0.39
COL27A1-201ENST00000356083 EPB41L1Q9H4G0 881 aa17.52■□□□□ 0.39
COL27A1-201ENST00000356083 GIMD1P0DJR0 217 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 ABATP80404 500 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 TKFCQ3LXA3 575 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 RASGEF1AQ8N9B8 481 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 C3orf20Q8ND61 904 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 CHST13Q8NET6 341 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 EPS8L3Q8TE67 593 aaKnown RBP17.51■□□□□ 0.39
COL27A1-201ENST00000356083 ATL1Q8WXF7 558 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 MAML3Q96JK9 1138 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 SPATA9Q9BWV2 254 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 CRISPLD1Q9H336 500 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 INTS10Q9NVR2 710 aaKnown RBP17.51■□□□□ 0.39
COL27A1-201ENST00000356083 ATP7AQ04656 1500 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 NAB2Q15742 525 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 EIF3MQ7L2H7 374 aaKnown RBP17.51■□□□□ 0.39
COL27A1-201ENST00000356083 MKNK1Q9BUB5 465 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 TAS2R13Q9NYV9 303 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 ZNF879B4DU55 563 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 SHC4Q6S5L8 630 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 EEF1AKMT1Q8WVE0 214 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 HMX1Q9NP08 348 aaPredicted RBP17.51■□□□□ 0.39
COL27A1-201ENST00000356083 NDUFAF1Q9Y375 327 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 MRPS23Q9Y3D9 190 aaKnown RBP17.51■□□□□ 0.39
COL27A1-201ENST00000356083 PCDHB5Q9Y5E4 795 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 KANSL1LA0AUZ9 987 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 SERPINA3P01011 423 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 TGFBR2P37173 567 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL27A1-201ENST00000356083 TAB1Q15750 504 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 TEKT5Q96M29 485 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 C1QTNF1Q9BXJ1 281 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 TIMM8BQ9Y5J9 83 aaPredicted RBP17.51■□□□□ 0.39
COL27A1-201ENST00000356083 CDC42BPGQ6DT37 1551 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 RGS14O43566 566 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 SNX4O95219 450 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 MUTP22033 750 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 ITGA9Q13797 1035 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 FMR1NBQ8N0W7 255 aaPredicted RBP17.51■□□□□ 0.39
COL27A1-201ENST00000356083 SAMD3Q8N6K7 520 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 FAM86B1E9PN63 330 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 FDXACB1Q9BRP7 624 aaPredicted RBP17.51■□□□□ 0.39
COL27A1-201ENST00000356083 ERP44Q9BS26 406 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 KLQ9UEF7 1012 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 ZFYVE16Q7Z3T8 1539 aa17.51■□□□□ 0.39
COL27A1-201ENST00000356083 TRBV23OR9-2A0A075B6M9 112 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 A0A075B6Q4 140 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 CCND1P24385 295 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 RAB2AP61019 212 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 MADCAM1Q13477 382 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 KBTBD2Q8IY47 623 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 RXFP2Q8WXD0 754 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 TBC1D13Q9NVG8 400 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 MAP2P11137 1827 aaKnown RBP17.5■□□□□ 0.39
COL27A1-201ENST00000356083 PSMD7P51665 324 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 SEC24CP53992 1094 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 PTPN5P54829 565 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 ABRQ12979 859 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 CCDC153Q494R4 210 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 BOLA3Q53S33 107 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 CAMK1DQ8IU85 385 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 PPP1R16AQ96I34 528 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 MARK4Q96L34 752 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 DDX18Q9NVP1 670 aaKnown RBP17.5■□□□□ 0.39
COL27A1-201ENST00000356083 OPTCQ9UBM4 332 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 TBC1D3DA0A087WVF3 549 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 TBC1D3IA0A087WXS9 549 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 TBC1D3EA0A087X179 549 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 TBC1D3KA0A087X1G2 549 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 A0A0A6YYK5 440 aaPredicted RBP17.5■□□□□ 0.39
COL27A1-201ENST00000356083 TBC1D3FA6NER0 549 aaPredicted RBP17.5■□□□□ 0.39
COL27A1-201ENST00000356083 TBC1D3LB9A6J9 549 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 RBP1P09455 135 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 TBC1D3HP0C7X1 549 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 UBA1P22314 1058 aaKnown RBP17.5■□□□□ 0.39
COL27A1-201ENST00000356083 TAS2R41P59536 307 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 ARMC12Q5T9G4 340 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 TBC1D3GQ6DHY5 549 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 TBC1D3CQ6IPX1 549 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 TBC1D3Q8IZP1 549 aaPredicted RBP17.5■□□□□ 0.39
COL27A1-201ENST00000356083 ACAT2Q9BWD1 397 aa17.5■□□□□ 0.39
COL27A1-201ENST00000356083 CHMP1AQ9HD42 196 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms