RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 TBCCD1Q9NVR7 557 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 MAGED2Q9UNF1 606 aaPredicted RBP9.58□□□□□ -0.88
SMG6-202ENST00000354901 GNEQ9Y223 722 aaKnown RBP9.58□□□□□ -0.88
SMG6-202ENST00000354901 TEX264Q9Y6I9 313 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 MGAMO43451 1857 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 C1orf232A0A0U1RR37 186 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 C2CD4BA6NLJ0 364 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 APOL1O14791 398 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 TM9SF1O15321 606 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 ITM2AO43736 263 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 DNAJA2O60884 412 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 DDHD2O94830 711 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 F7P08709 466 aaPredicted RBP9.58□□□□□ -0.88
SMG6-202ENST00000354901 PROZP22891 400 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 EDNRBP24530 442 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 GBE1Q04446 702 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 BNIP3Q12983 259 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 GRM1Q13255 1194 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 TFDP2Q14188 446 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 NR1D2Q14995 579 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 PCDH19Q8TAB3 1148 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 ACTRT2Q8TDY3 377 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 VPS11Q9H270 941 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 SMYD2Q9NRG4 433 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 SOX13Q9UN79 622 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 TNFSF13BQ9Y275 285 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 LCTP09848 1927 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 DNAH12Q6ZR08 3092 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 DLDP09622 509 aaKnown RBP9.58□□□□□ -0.88
SMG6-202ENST00000354901 VDRP11473 427 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 OSBPP22059 807 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 ADORA2BP29275 332 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 SDC4P31431 198 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 STIP1P31948 543 aaKnown RBP9.58□□□□□ -0.88
SMG6-202ENST00000354901 PHKA2P46019 1235 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 NR1H2P55055 460 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 KCNJ11Q14654 390 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 CCDC14Q49A88 953 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 PRR23BQ6ZRT6 265 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 SNX29P2Q8IUI4 249 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 KIAA2013Q8IYS2 634 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 PGLYRP2Q96PD5 576 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 DHRS4Q9BTZ2 278 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 ZFYVE28Q9HCC9 887 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 DPP3Q9NY33 737 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 MFHAS1Q9Y4C4 1052 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 CEPT1Q9Y6K0 416 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 A0A0G2JMZ2 1700 aa9.58□□□□□ -0.88
SMG6-202ENST00000354901 SOCS7O14512 581 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 CNOT3O75175 753 aaKnown RBP9.57□□□□□ -0.88
SMG6-202ENST00000354901 CSPG5O95196 566 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 IL18RAPO95256 599 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 CSH1P0DML2 217 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 CSH2P0DML3 217 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 P4HA1P13674 534 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 UGT1A6P19224 532 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 UGT1A1P22309 533 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 UGT1A4P22310 534 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 UGT1A3P35503 534 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 UGT1A5P35504 534 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 GMPRP36959 345 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 IREB2P48200 963 aaKnown RBP9.57□□□□□ -0.88
SMG6-202ENST00000354901 SLC18A1P54219 525 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 ADAM17P78536 824 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 BST1Q10588 318 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 GRM2Q14416 872 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 CYP4V2Q6ZWL3 525 aaPredicted RBP9.57□□□□□ -0.88
SMG6-202ENST00000354901 ILDR2Q71H61 639 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 SLC26A11Q86WA9 606 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 SULF1Q8IWU6 871 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 NDUFAF2Q8N183 169 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 OR6B3Q8NGW1 331 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 ALKBH8Q96BT7 664 aaKnown RBP9.57□□□□□ -0.88
SMG6-202ENST00000354901 MMP19Q99542 508 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 FERMT1Q9BQL6 677 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 MRPL45Q9BRJ2 306 aaKnown RBP9.57□□□□□ -0.88
SMG6-202ENST00000354901 NT5C1AQ9BXI3 368 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 FAM49AQ9H0Q0 323 aaPredicted RBP9.57□□□□□ -0.88
SMG6-202ENST00000354901 SMARCAD1Q9H4L7 1026 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 EHD1Q9H4M9 534 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 PPCSQ9HAB8 311 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 TBC1D30Q9Y2I9 924 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 PCDHGA3Q9Y5H0 932 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 A0A088AWK7 358 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 IGKV6-21A0A0C4DH24 114 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 PSMD12O00232 456 aaPredicted RBP9.57□□□□□ -0.88
SMG6-202ENST00000354901 HBP1O60381 514 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 METTL18O95568 372 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 LCP1P13796 627 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 CCDC130P13994 396 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 ZBTB17Q13105 803 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 SF3B4Q15427 424 aaKnown RBP eCLIP9.57□□□□□ -0.88
SMG6-202ENST00000354901 RARS2Q5T160 578 aaKnown RBP9.57□□□□□ -0.88
SMG6-202ENST00000354901 C16orf46Q6P387 395 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 VASH1Q7L8A9 365 aaPredicted RBP9.57□□□□□ -0.88
SMG6-202ENST00000354901 CROCCP3Q8IVE0 287 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 PQLC3Q8N755 202 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 ZSCAN18Q8TBC5 510 aaPredicted RBP9.57□□□□□ -0.88
SMG6-202ENST00000354901 STARD8Q92502 1023 aa9.57□□□□□ -0.88
SMG6-202ENST00000354901 NDRG1Q92597 394 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms