RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 NKD2Q969F2 451 aaPredicted RBP11.06□□□□□ -0.64
SND1-201ENST00000354725 TTC17Q96AE7 1141 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 APBA2Q99767 749 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 WDR83Q9BRX9 315 aaKnown RBP11.06□□□□□ -0.64
SND1-201ENST00000354725 TCF7L2Q9NQB0 619 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 RRN3Q9NYV6 651 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 MOCS1Q9NZB8 636 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 SENP1Q9P0U3 644 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 FAM170AA1A519 330 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 E7ESA3 106 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 AP1G1O43747 822 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 RGS20O76081 388 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 RASGRP1O95267 797 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 L1CAMP32004 1257 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 GJA9P57773 515 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 PPP2R2BQ00005 443 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 MTMR1Q13613 665 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 SMAD1Q15797 465 aaKnown RBP11.05□□□□□ -0.64
SND1-201ENST00000354725 EFHC2Q5JST6 749 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 IZUMO3Q5VZ72 239 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 ANKRD35Q8N283 1001 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 GPD1LQ8N335 351 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 AADATQ8N5Z0 425 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.05□□□□□ -0.64
SND1-201ENST00000354725 ERLEC1Q96DZ1 483 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 TSGA13Q96PP4 275 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 SLITRK1Q96PX8 696 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 OSBPL8Q9BZF1 889 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 HAPLN2Q9GZV7 340 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 MARCH7Q9H992 704 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 KANSL3Q9P2N6 904 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 THEGQ9P2T0 379 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 HEMK1Q9Y5R4 338 aaPredicted RBP11.05□□□□□ -0.64
SND1-201ENST00000354725 PTCH2Q9Y6C5 1203 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 AK5Q9Y6K8 562 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 A6NL46 340 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 CENPBD1B2RD01 187 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 PGK2P07205 417 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 POLR2BP30876 1174 aaKnown RBP11.05□□□□□ -0.64
SND1-201ENST00000354725 ZNF135P52742 658 aaPredicted RBP11.05□□□□□ -0.64
SND1-201ENST00000354725 CHN2P52757 468 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 PPA1Q15181 289 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 CYP4A22Q5TCH4 519 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 TDRD10Q5VZ19 366 aaKnown RBP11.05□□□□□ -0.64
SND1-201ENST00000354725 SH2D5Q6ZV89 423 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 PRUNE1Q86TP1 453 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 ATP6V0D2Q8N8Y2 350 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 DNERQ8NFT8 737 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 CFAP36Q96G28 342 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 C19orf43Q9BQ61 176 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 SENP6Q9GZR1 1112 aaPredicted RBP11.05□□□□□ -0.64
SND1-201ENST00000354725 SERHL2Q9H4I8 314 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 APOBEC3GQ9HC16 384 aaKnown RBP11.05□□□□□ -0.64
SND1-201ENST00000354725 XPNPEP1Q9NQW7 623 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 ZIM2Q9NZV7 527 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 SLC24A2Q9UI40 661 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 TSR3Q9UJK0 312 aaKnown RBP11.05□□□□□ -0.64
SND1-201ENST00000354725 SMG5Q9UPR3 1016 aaKnown RBP11.05□□□□□ -0.64
SND1-201ENST00000354725 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.05□□□□□ -0.64
SND1-201ENST00000354725 CALCAP01258 141 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 ITGAVP06756 1048 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 MORF4L2Q15014 288 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 BORAQ6PGQ7 559 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 BIRC8Q96P09 236 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 LRRC37BQ96QE4 947 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 RBM15Q96T37 977 aaKnown RBP eCLIP11.05□□□□□ -0.649e-7■■□□□ 14.3
SND1-201ENST00000354725 MIPEPQ99797 713 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 CADM1Q9BY67 442 aaKnown RBP11.05□□□□□ -0.64
SND1-201ENST00000354725 POU2F3Q9UKI9 436 aa11.05□□□□□ -0.64
SND1-201ENST00000354725 CBX6O95503 412 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 ZNF865P0CJ78 1059 aaPredicted RBP11.04□□□□□ -0.64
SND1-201ENST00000354725 CYBAP13498 195 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 CDH5P33151 784 aaPredicted RBP11.04□□□□□ -0.64
SND1-201ENST00000354725 CSTF3Q12996 717 aaKnown RBP11.04□□□□□ -0.64
SND1-201ENST00000354725 TRIM32Q13049 653 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 BAATQ14032 418 aaPredicted RBP11.04□□□□□ -0.64
SND1-201ENST00000354725 FAM91A1Q658Y4 838 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 TAPT1Q6NXT6 567 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 DCLRE1AQ6PJP8 1040 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 POTEHQ6S545 545 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 LRRTM3Q86VH5 581 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 TAB3Q8N5C8 712 aaPredicted RBP11.04□□□□□ -0.64
SND1-201ENST00000354725 CHPT1Q8WUD6 406 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 FAR2Q96K12 515 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 MOGAT1Q96PD6 335 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 WDR6Q9NNW5 1121 aaKnown RBP11.04□□□□□ -0.64
SND1-201ENST00000354725 ZDHHC7Q9NXF8 308 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 GMIPQ9P107 970 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 FBXO10Q9UK96 956 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 SPEF1Q9Y4P9 236 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 DENND3A2RUS2 1198 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 TMEM191CA6NGB0 347 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 SYCE1LA8MT33 242 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 CAPN14A8MX76 684 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 WDR64B1ANS9 1081 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 TMEM191BP0C7N4 346 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 MMP8P22894 467 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 RENBPP51606 427 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 GPX6P59796 221 aa11.04□□□□□ -0.64
SND1-201ENST00000354725 IL9RQ01113 521 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms