RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 SPATS2Q86XZ4 545 aaKnown RBP16.34■□□□□ 0.21
PDGFA-201ENST00000354513 ZNF683Q8IZ20 524 aa16.34■□□□□ 0.21
PDGFA-201ENST00000354513 C1orf131Q8NDD1 294 aaKnown RBP16.34■□□□□ 0.21
PDGFA-201ENST00000354513 OR14C36Q8NHC7 312 aa16.34■□□□□ 0.21
PDGFA-201ENST00000354513 GBP4Q96PP9 640 aa16.34■□□□□ 0.21
PDGFA-201ENST00000354513 COX16Q9P0S2 106 aa16.34■□□□□ 0.21
PDGFA-201ENST00000354513 FTSJ1Q9UET6 329 aa16.34■□□□□ 0.21
PDGFA-201ENST00000354513 RWDD2AQ9UIY3 292 aa16.34■□□□□ 0.21
PDGFA-201ENST00000354513 CEP83Q9Y592 693 aa16.34■□□□□ 0.21
PDGFA-201ENST00000354513 HS3ST4Q9Y661 456 aa16.34■□□□□ 0.21
PDGFA-201ENST00000354513 GOLGA4Q13439 2230 aaKnown RBP16.34■□□□□ 0.21
PDGFA-201ENST00000354513 TRABD2BA6NFA1 517 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 RNF103O00237 685 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 ATP9BO43861 1147 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 HSF2BPO75031 334 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 RTN2O75298 545 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 DAB1O75553 588 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 IL1BP01584 269 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 GLI1P08151 1106 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 PON1P27169 355 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 EPHA8P29322 1005 aaPredicted RBP16.33■□□□□ 0.2
PDGFA-201ENST00000354513 NXPH1P58417 271 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 DNAJC3Q13217 504 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 AUHQ13825 339 aaKnown RBP16.33■□□□□ 0.2
PDGFA-201ENST00000354513 C5orf22Q49AR2 442 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 AGBL4Q5VU57 503 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 RNF219Q5W0B1 726 aaPredicted RBP16.33■□□□□ 0.2
PDGFA-201ENST00000354513 CLEC17AQ6ZS10 378 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 CCDC117Q8IWD4 279 aaPredicted RBP16.33■□□□□ 0.2
PDGFA-201ENST00000354513 PPP1R13BQ96KQ4 1090 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 SPAG5Q96R06 1193 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 PSMB7Q99436 277 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 AASDHPPTQ9NRN7 309 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 VANGL2Q9ULK5 521 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 ACACAQ13085 2346 aa16.33■□□□□ 0.2
PDGFA-201ENST00000354513 ENC1O14682 589 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 PLRG1O43660 514 aaKnown RBP16.32■□□□□ 0.2
PDGFA-201ENST00000354513 DFNA5O60443 496 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 CNTN5O94779 1100 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 CCR1P32246 355 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 CLCN1P35523 988 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 USP8P40818 1118 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 ACADVLP49748 655 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 TAS2R38P59533 333 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 CDK17Q00537 523 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 BNIP3Q12983 259 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 CCDC157Q569K6 752 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 SFMBT2Q5VUG0 894 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.32■□□□□ 0.2
PDGFA-201ENST00000354513 Q6ZVU0 165 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 PDZD3Q86UT5 571 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 GALNT15Q8N3T1 639 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 SERAC1Q96JX3 654 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 RPRD1AQ96P16 312 aaPredicted RBP16.32■□□□□ 0.2
PDGFA-201ENST00000354513 FEM1AQ9BSK4 669 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 CAAP1Q9H8G2 361 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 PLCB1Q9NQ66 1216 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 PIGVQ9NUD9 493 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 KIAA1468Q9P260 1216 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 SNX10Q9Y5X0 201 aa16.32■□□□□ 0.2
PDGFA-201ENST00000354513 BPTFQ12830 3046 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 GTPBP10A4D1E9 387 aaKnown RBP16.31■□□□□ 0.2
PDGFA-201ENST00000354513 PAGE1O75459 146 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 ADCY5O95622 1261 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 CTSLP07711 333 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 SULT2A1Q06520 285 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 CYP4F3Q08477 520 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 CNTN1Q12860 1018 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 SFSWAPQ12872 951 aaKnown RBP16.31■□□□□ 0.2
PDGFA-201ENST00000354513 POM121L1PQ3SYA9 428 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 ALFQ53S48 1182 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 EFHC1Q5JVL4 640 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 RABGAP1LQ5R372 815 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 NAPEPLDQ6IQ20 393 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 GBP6Q6ZN66 633 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 C11orf57Q6ZUT1 292 aaPredicted RBP16.31■□□□□ 0.2
PDGFA-201ENST00000354513 SLC26A9Q7LBE3 791 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 SLC47A2Q86VL8 602 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 SH2D3CQ8N5H7 860 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 ZNF397Q8NF99 534 aaPredicted RBP16.31■□□□□ 0.2
PDGFA-201ENST00000354513 TSC1Q92574 1164 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 CRELD1Q96HD1 420 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 CNDP2Q96KP4 475 aaKnown RBP16.31■□□□□ 0.2
PDGFA-201ENST00000354513 NPY6RQ99463 290 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 GDF3Q9NR23 364 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 PPM1HQ9ULR3 514 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 TBC1D30Q9Y2I9 924 aa16.31■□□□□ 0.2
PDGFA-201ENST00000354513 TLR4O00206 839 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 SLC2A3P11169 496 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 SRCP12931 536 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 ABCB4P21439 1286 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 MAT2AP31153 395 aaKnown RBP16.3■□□□□ 0.2
PDGFA-201ENST00000354513 RXRGP48443 463 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 SLC6A3Q01959 620 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 NME3Q13232 169 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 DLG2Q15700 870 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 EXOC3L4Q17RC7 722 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 INAVAQ3KP66 663 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 SOWAHCQ53LP3 525 aaPredicted RBP16.3■□□□□ 0.2
PDGFA-201ENST00000354513 PIP5KL1Q5T9C9 394 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms