RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 ADGRF1Q5T601 910 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 ZNF697Q5TEC3 545 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 PPP2R2DQ66LE6 453 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 TIGD7Q6NT04 549 aaPredicted RBP21.02■□□□□ 0.95
TRIM4-202ENST00000354241 ADAMTS19Q8TE59 1207 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 PRICKLE1Q96MT3 831 aaPredicted RBP21.02■□□□□ 0.95
TRIM4-202ENST00000354241 VAT1Q99536 393 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 PHACTR1Q9C0D0 580 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 IGSF9Q9P2J2 1179 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 ZNF212Q9UDV6 495 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 RSPH14Q9UHP6 348 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 IPO11Q9UI26 975 aaKnown RBP21.02■□□□□ 0.95
TRIM4-202ENST00000354241 MSRAQ9UJ68 235 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 TRHDEQ9UKU6 1024 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 ALOX15BO15296 676 aa21.01■□□□□ 0.95
TRIM4-202ENST00000354241 EIF3HO15372 352 aaKnown RBP eCLIP21.01■□□□□ 0.95
TRIM4-202ENST00000354241 RAMP2O60895 175 aa21.01■□□□□ 0.95
TRIM4-202ENST00000354241 CCNB1P14635 433 aa21.01■□□□□ 0.95
TRIM4-202ENST00000354241 RPS24P62847 133 aaKnown RBP21.01■□□□□ 0.95
TRIM4-202ENST00000354241 ZXDBP98169 803 aa21.01■□□□□ 0.95
TRIM4-202ENST00000354241 ITPRIPL1Q6GPH6 555 aa21.01■□□□□ 0.95
TRIM4-202ENST00000354241 ADGRD2Q7Z7M1 963 aa21.01■□□□□ 0.95
TRIM4-202ENST00000354241 LRRC49Q8IUZ0 686 aa21.01■□□□□ 0.95
TRIM4-202ENST00000354241 SERPINB12Q96P63 405 aa21.01■□□□□ 0.95
TRIM4-202ENST00000354241 DNMT3BQ9UBC3 853 aaKnown RBP21.01■□□□□ 0.95
TRIM4-202ENST00000354241 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.01■□□□□ 0.95
TRIM4-202ENST00000354241 GOLGA6L10A6NI86 522 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 MATN3O15232 486 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 XYLBO75191 536 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 HOXA9P31269 272 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 POLD3Q15054 466 aaPredicted RBP21■□□□□ 0.95
TRIM4-202ENST00000354241 SHKBP1Q8TBC3 707 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 TCEAL4Q96EI5 215 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 TTC25Q96NG3 672 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 FRMD8Q9BZ67 464 aaPredicted RBP21■□□□□ 0.95
TRIM4-202ENST00000354241 GBA3Q9H227 469 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 LSM7Q9UK45 103 aaKnown RBP21■□□□□ 0.95
TRIM4-202ENST00000354241 HCFC2Q9Y5Z7 792 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 HELZP42694 1942 aaKnown RBP21■□□□□ 0.95
TRIM4-202ENST00000354241 E7ESA3 106 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 AVILO75366 819 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 FGF19O95750 216 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 LATS1O95835 1130 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 RHOP08100 348 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 HNRNPA1P09651 372 aaKnown RBP eCLIP21■□□□□ 0.95
TRIM4-202ENST00000354241 NFKB1P19838 968 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 CD68P34810 354 aaPredicted RBP21■□□□□ 0.95
TRIM4-202ENST00000354241 SGSHP51688 502 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 CDH4P55283 916 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 IFI35P80217 286 aaPredicted RBP21■□□□□ 0.95
TRIM4-202ENST00000354241 SLC7A9P82251 487 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 GPR158Q5T848 1215 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 PDCD7Q8N8D1 485 aaKnown RBP21■□□□□ 0.95
TRIM4-202ENST00000354241 MCUQ8NE86 351 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 GDPD5Q8WTR4 605 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 PYROXD1Q8WU10 500 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 ARL8AQ96BM9 186 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 TEKT5Q96M29 485 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 GDF15Q99988 308 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 SLC46A2Q9BY10 475 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 CENPHQ9H3R5 247 aa21■□□□□ 0.95
TRIM4-202ENST00000354241 GOLGA8KD6RF30 607 aa20.99■□□□□ 0.95
TRIM4-202ENST00000354241 RNF40O75150 1001 aa20.99■□□□□ 0.95
TRIM4-202ENST00000354241 MYZAPP0CAP1 466 aa20.99■□□□□ 0.95
TRIM4-202ENST00000354241 EPHA5P54756 1037 aa20.99■□□□□ 0.95
TRIM4-202ENST00000354241 RAB30Q15771 203 aa20.99■□□□□ 0.95
TRIM4-202ENST00000354241 KRT71Q3SY84 523 aa20.99■□□□□ 0.95
TRIM4-202ENST00000354241 PARP15Q460N3 678 aa20.99■□□□□ 0.95
TRIM4-202ENST00000354241 CAPN12Q6ZSI9 719 aa20.99■□□□□ 0.95
TRIM4-202ENST00000354241 FBXO36Q8NEA4 188 aa20.99■□□□□ 0.95
TRIM4-202ENST00000354241 ZSCAN18Q8TBC5 510 aaPredicted RBP20.99■□□□□ 0.95
TRIM4-202ENST00000354241 SP110Q9HB58 689 aa20.99■□□□□ 0.95
TRIM4-202ENST00000354241 LRRC4CQ9HCJ2 640 aa20.99■□□□□ 0.95
TRIM4-202ENST00000354241 EIF2B3Q9NR50 452 aaKnown RBP20.99■□□□□ 0.95
TRIM4-202ENST00000354241 CFAP97Q9P2B7 532 aa20.99■□□□□ 0.95
TRIM4-202ENST00000354241 DPP7Q9UHL4 492 aa20.99■□□□□ 0.95
TRIM4-202ENST00000354241 STOML2Q9UJZ1 356 aa20.99■□□□□ 0.95
TRIM4-202ENST00000354241 SH3BP1Q9Y3L3 701 aa20.99■□□□□ 0.95
TRIM4-202ENST00000354241 TTLL3Q9Y4R7 772 aa20.99■□□□□ 0.95
TRIM4-202ENST00000354241 NEBLO76041 1014 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 SARNPP82979 210 aaKnown RBP20.98■□□□□ 0.95
TRIM4-202ENST00000354241 CBX1P83916 185 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 TEAD2Q15562 447 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 ANO4Q32M45 955 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 CAND1Q86VP6 1230 aaKnown RBP20.98■□□□□ 0.95
TRIM4-202ENST00000354241 SMG9Q9H0W8 520 aaKnown RBP20.98■□□□□ 0.95
TRIM4-202ENST00000354241 TLE6Q9H808 572 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 VPS37BQ9H9H4 285 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 CHMP2BQ9UQN3 213 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 J3KR12 359 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 POLR3GO15318 223 aaPredicted RBP20.98■□□□□ 0.95
TRIM4-202ENST00000354241 GREM1O60565 184 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 PFKLP17858 780 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 YBEYP58557 167 aaPredicted RBP20.98■□□□□ 0.95
TRIM4-202ENST00000354241 ARHGAP15Q53QZ3 475 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 TTMPQ5BVD1 217 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 ELMSAN1Q6PJG2 1045 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 Q6ZNB5 142 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 ZNF534Q76KX8 674 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms