RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 SP3Q02447 781 aa13.67□□□□□ -0.22
LMBR1-201ENST00000353442 CYP4F3Q08477 520 aa13.67□□□□□ -0.22
LMBR1-201ENST00000353442 MPPE1Q53F39 396 aa13.67□□□□□ -0.22
LMBR1-201ENST00000353442 EID3Q8N140 333 aa13.67□□□□□ -0.22
LMBR1-201ENST00000353442 GPC6Q9Y625 555 aaPredicted RBP13.67□□□□□ -0.22
LMBR1-201ENST00000353442 A0A0A6YYK5 440 aaPredicted RBP13.67□□□□□ -0.22
LMBR1-201ENST00000353442 PSIP1O75475 530 aaKnown RBP13.67□□□□□ -0.22
LMBR1-201ENST00000353442 SCNN1GP51170 649 aa13.67□□□□□ -0.22
LMBR1-201ENST00000353442 ARMCX6Q7L4S7 300 aa13.67□□□□□ -0.22
LMBR1-201ENST00000353442 MTMR8Q96EF0 704 aa13.67□□□□□ -0.22
LMBR1-201ENST00000353442 GAD1Q99259 594 aa13.67□□□□□ -0.22
LMBR1-201ENST00000353442 CDHR2Q9BYE9 1310 aa13.67□□□□□ -0.22
LMBR1-201ENST00000353442 FAM92AA1XBS5 289 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 SPAG6O75602 509 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 PSMD4P55036 377 aaKnown RBP13.66□□□□□ -0.22
LMBR1-201ENST00000353442 BNC2Q6ZN30 1099 aaPredicted RBP13.66□□□□□ -0.22
LMBR1-201ENST00000353442 ING5Q8WYH8 240 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 RIT2Q99578 217 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 PIGUQ9H490 435 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 EFCAB1Q9HAE3 211 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 CMTM6Q9NX76 183 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 OPTCQ9UBM4 332 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 ZMYND8Q9ULU4 1186 aaPredicted RBP13.66□□□□□ -0.22
LMBR1-201ENST00000353442 MGAT1P26572 445 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 MDH1P40925 334 aaKnown RBP13.66□□□□□ -0.22
LMBR1-201ENST00000353442 NPTX2P47972 431 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 CCDC144BQ3MJ40 725 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 MINDY4Q4G0A6 757 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 PABPC1LQ4VXU2 614 aaKnown RBP13.66□□□□□ -0.22
LMBR1-201ENST00000353442 KIAA0408Q6ZU52 694 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 KCTD8Q6ZWB6 473 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 POMKQ9H5K3 350 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 TAF4O00268 1085 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 YBX3P16989 372 aaKnown RBP eCLIP13.66□□□□□ -0.229e-8■■■□□ 14.6
LMBR1-201ENST00000353442 RAB27AP51159 221 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 DNAAF5Q86Y56 855 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 DPF2Q92785 391 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 OMA1Q96E52 524 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 ASB8Q9H765 288 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 FAM153AQ9UHL3 310 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 LIN7AO14910 233 aaPredicted RBP13.66□□□□□ -0.22
LMBR1-201ENST00000353442 AMZ1Q400G9 498 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 TFDP3Q5H9I0 405 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 FMR1NBQ8N0W7 255 aaPredicted RBP13.66□□□□□ -0.22
LMBR1-201ENST00000353442 OR10H5Q8NGA6 315 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 ALDH8A1Q9H2A2 487 aaPredicted RBP13.66□□□□□ -0.22
LMBR1-201ENST00000353442 PHF11Q9UIL8 331 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 ACOT9Q9Y305 439 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 NUP153P49790 1475 aaKnown RBP13.66□□□□□ -0.22
LMBR1-201ENST00000353442 RBP1P09455 135 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 GDI2P50395 445 aaKnown RBP13.66□□□□□ -0.22
LMBR1-201ENST00000353442 NAB2Q15742 525 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 PAGE2BQ5JRK9 111 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 C4orf22Q6V702 233 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 HDDC3Q8N4P3 179 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 POLE3Q9NRF9 147 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 CISHQ9NSE2 258 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 TSPAN16Q9UKR8 245 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 NR2F1P10589 423 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 PARP8Q8N3A8 854 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 RUBCNQ92622 972 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 FEM1CQ96JP0 617 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 SPATA9Q9BWV2 254 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 SLC12A4Q9UP95 1085 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 NPC1L1Q9UHC9 1359 aa13.66□□□□□ -0.22
LMBR1-201ENST00000353442 SLC37A4O43826 429 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 BGNP21810 368 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 MUTP22033 750 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 VPS72Q15906 364 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 CD302Q8IX05 232 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 SLC2A14Q8TDB8 520 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 RNF121Q9H920 327 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 AGPAT3Q9NRZ7 376 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 PSME2Q9UL46 239 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 PIK3CDO00329 1044 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 MAGEB3O15480 346 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 EPN2O95208 641 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 THRAP10827 490 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 PLGLB1Q02325 96 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 ZNF470Q6ECI4 717 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 P4HA3Q7Z4N8 544 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 SLC47A2Q86VL8 602 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 GPSM1Q86YR5 675 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 FAM9CQ8IZT9 166 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 AGGF1Q8N302 714 aaeCLIP13.65□□□□□ -0.222e-17■■■■■ 34.4
LMBR1-201ENST00000353442 PANX3Q96QZ0 392 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 ZNF780BQ9Y6R6 833 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 VAPBO95292 243 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 PLGP00747 810 aaPredicted RBP13.65□□□□□ -0.22
LMBR1-201ENST00000353442 ABCG1P45844 678 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 ATXN1P54253 815 aaKnown RBP13.65□□□□□ -0.22
LMBR1-201ENST00000353442 SNRPD1P62314 119 aaKnown RBP13.65□□□□□ -0.22
LMBR1-201ENST00000353442 FAM98BQ52LJ0 330 aaKnown RBP13.65□□□□□ -0.22
LMBR1-201ENST00000353442 RNF148Q8N7C7 305 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 RNF145Q96MT1 663 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 RIMKLBQ9ULI2 386 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 INVSQ9Y283 1065 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 ERVK-9P63128 1117 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 SLC29A2Q14542 456 aa13.65□□□□□ -0.22
LMBR1-201ENST00000353442 OR14C36Q8NHC7 312 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms