RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 BMPR2Q13873 1038 aa8.82□□□□□ -1
TRIM55-204ENST00000353317 MRPL58Q14197 206 aaKnown RBP8.82□□□□□ -1
TRIM55-204ENST00000353317 CHI3L2Q15782 390 aa8.82□□□□□ -1
TRIM55-204ENST00000353317 SLC39A12Q504Y0 691 aa8.82□□□□□ -1
TRIM55-204ENST00000353317 TEX44Q53QW1 395 aa8.82□□□□□ -1
TRIM55-204ENST00000353317 RAB41Q5JT25 222 aa8.82□□□□□ -1
TRIM55-204ENST00000353317 VARS2Q5ST30 1063 aaKnown RBP8.82□□□□□ -1
TRIM55-204ENST00000353317 FAXCQ5TGI0 409 aa8.82□□□□□ -1
TRIM55-204ENST00000353317 SLC26A9Q7LBE3 791 aa8.82□□□□□ -1
TRIM55-204ENST00000353317 ABI1Q8IZP0 508 aa8.82□□□□□ -1
TRIM55-204ENST00000353317 ARHGAP24Q8N264 748 aa8.82□□□□□ -1
TRIM55-204ENST00000353317 E2F7Q96AV8 911 aa8.82□□□□□ -1
TRIM55-204ENST00000353317 HSFY1Q96LI6 401 aa8.82□□□□□ -1
TRIM55-204ENST00000353317 PGLYRP2Q96PD5 576 aa8.82□□□□□ -1
TRIM55-204ENST00000353317 FAM193BQ96PV7 902 aaPredicted RBP8.82□□□□□ -1
TRIM55-204ENST00000353317 PANX3Q96QZ0 392 aa8.82□□□□□ -1
TRIM55-204ENST00000353317 TRIM56Q9BRZ2 755 aaKnown RBP8.82□□□□□ -1
TRIM55-204ENST00000353317 ANLNQ9NQW6 1124 aa8.82□□□□□ -1
TRIM55-204ENST00000353317 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.82□□□□□ -1
TRIM55-204ENST00000353317 SIRPGQ9P1W8 387 aa8.82□□□□□ -1
TRIM55-204ENST00000353317 PPARGC1AQ9UBK2 798 aaKnown RBP8.82□□□□□ -1
TRIM55-204ENST00000353317 LRFN2Q9ULH4 789 aa8.82□□□□□ -1
TRIM55-204ENST00000353317 DOCK6Q96HP0 2047 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 MYO16Q9Y6X6 1858 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 F8W8V4 182 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 KRT37O76014 449 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 RNF8O76064 485 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 ENDOD1O94919 500 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 MAP3K6O95382 1288 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 ALDH2P05091 517 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 TYMPP19971 482 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 IL4RP24394 825 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 CALRP27797 417 aaKnown RBP8.81□□□□□ -1
TRIM55-204ENST00000353317 AQP5P55064 265 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 CDH6P55285 790 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 C1orf228Q6PIY5 440 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 RIPOR1Q6ZS17 1223 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 CAND1Q86VP6 1230 aaKnown RBP8.81□□□□□ -1
TRIM55-204ENST00000353317 SCUBE1Q8IWY4 988 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 DEFB106AQ8N104 65 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 GPR152Q8TDT2 470 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 FAM172AQ8WUF8 416 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 LRRN4Q8WUT4 740 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 KCTD13Q8WZ19 329 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 TOP1MTQ969P6 601 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 TBCBQ99426 244 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 CNPY3Q9BT09 278 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 RC3H2Q9HBD1 1191 aaKnown RBP8.81□□□□□ -1
TRIM55-204ENST00000353317 POPDC2Q9HBU9 364 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 NGRNQ9NPE2 291 aaKnown RBP8.81□□□□□ -1
TRIM55-204ENST00000353317 ZC3H7BQ9UGR2 993 aaKnown RBP8.81□□□□□ -1
TRIM55-204ENST00000353317 SLC7A8Q9UHI5 535 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 ZNF180Q9UJW8 692 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 HMX2A2RU54 273 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 H7C0C1 242 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 KCNN4O15554 427 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 TM7SF2O76062 418 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 TOP3BO95985 862 aaKnown RBP8.81□□□□□ -1
TRIM55-204ENST00000353317 PRKCHP24723 683 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 PCSK1P29120 753 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 ATP5OP48047 213 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 ALDH18A1P54886 795 aaKnown RBP8.81□□□□□ -1
TRIM55-204ENST00000353317 IKBKEQ14164 716 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 CNKSR3Q6P9H4 555 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 PRSS55Q6UWB4 352 aaPredicted RBP8.81□□□□□ -1
TRIM55-204ENST00000353317 OTOP2Q7RTS6 562 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 METTL23Q86XA0 190 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 CCNJLQ8IV13 435 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 ULK2Q8IYT8 1036 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 ATAD1Q8NBU5 361 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 ADAM32Q8TC27 787 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 CENPIQ92674 756 aaPredicted RBP8.81□□□□□ -1
TRIM55-204ENST00000353317 DDX50Q9BQ39 737 aaKnown RBP8.81□□□□□ -1
TRIM55-204ENST00000353317 EBF4Q9BQW3 602 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 THTPAQ9BU02 230 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 CCDC106Q9BWC9 280 aa8.81□□□□□ -1
TRIM55-204ENST00000353317 SZT2Q5T011 3432 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 COL4A4P53420 1690 aaPredicted RBP8.8□□□□□ -1
TRIM55-204ENST00000353317 MAGEA13PA6NCF6 341 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 PRR5-ARHGAP8B1AHC4 643 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 DPYSL4O14531 572 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 TNFRSF10BO14763 440 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 TBC1D4O60343 1298 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 APRTP07741 180 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 CSH1P0DML2 217 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 CSH2P0DML3 217 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 ANPEPP15144 967 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 RPL17P18621 184 aaKnown RBP8.8□□□□□ -1
TRIM55-204ENST00000353317 FGFR3P22607 806 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 RBL1P28749 1068 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 DAOAP59103 153 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 ACTR3P61158 418 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 ARHGAP8P85298 464 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 DDR2Q16832 855 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 ATG16L1Q676U5 607 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 SCYL2Q6P3W7 929 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 FUT10Q6P4F1 479 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 ZCCHC23Q6ZST2 131 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 NET1Q7Z628 596 aaPredicted RBP8.8□□□□□ -1
TRIM55-204ENST00000353317 NECAB2Q7Z6G3 386 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms