RNA–Protein interactions for RNA: ENST00000349505.4

HDAC10-202, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best) BASIC

Gene HDAC10, Length 1,950 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-202ENST00000349505 CASC4Q6P4E1 433 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 ANKS3Q6ZW76 656 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 ZSCAN18Q8TBC5 510 aaPredicted RBP18.37■□□□□ 0.53
HDAC10-202ENST00000349505 C2orf15Q8WU43 125 aaKnown RBP18.37■□□□□ 0.53
HDAC10-202ENST00000349505 SPATA17Q96L03 361 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 MYLK2Q9H1R3 596 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 HIPK3Q9H422 1215 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 FNIP2Q9P278 1114 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 FNDC1Q4ZHG4 1894 aaPredicted RBP18.37■□□□□ 0.53
HDAC10-202ENST00000349505 TBKBP1A7MCY6 615 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 MGAT1P26572 445 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 CD68P34810 354 aaPredicted RBP18.37■□□□□ 0.53
HDAC10-202ENST00000349505 SERPINB9P50453 376 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 MLLT6P55198 1093 aaPredicted RBP18.37■□□□□ 0.53
HDAC10-202ENST00000349505 SESN2P58004 480 aaPredicted RBP18.37■□□□□ 0.53
HDAC10-202ENST00000349505 DNAJC3Q13217 504 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 TRMT10BQ6PF06 316 aaKnown RBP18.37■□□□□ 0.53
HDAC10-202ENST00000349505 LVRNQ6Q4G3 990 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 FAM47EQ6ZV65 393 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 ARHGAP12Q8IWW6 846 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 LRRC43Q8N309 656 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 TCP10LQ8TDR4 215 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 DEPDC1BQ8WUY9 529 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 NSMCE1Q8WV22 266 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 ERP27Q96DN0 273 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 OXNAD1Q96HP4 312 aaPredicted RBP18.37■□□□□ 0.53
HDAC10-202ENST00000349505 APOPT1Q96IL0 206 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 CELF6Q96J87 481 aaKnown RBP18.37■□□□□ 0.53
HDAC10-202ENST00000349505 SERAC1Q96JX3 654 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 B3GALT6Q96L58 329 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 OLA1Q9NTK5 396 aaKnown RBP18.37■□□□□ 0.53
HDAC10-202ENST00000349505 GMIPQ9P107 970 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 LNPEPQ9UIQ6 1025 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 NUDT5Q9UKK9 219 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 HS3ST4Q9Y661 456 aa18.37■□□□□ 0.53
HDAC10-202ENST00000349505 SCN5AQ14524 2016 aa18.36■□□□□ 0.53
HDAC10-202ENST00000349505 IL1BP01584 269 aa18.36■□□□□ 0.53
HDAC10-202ENST00000349505 SF3A3Q12874 501 aaKnown RBP eCLIP18.36■□□□□ 0.532e-6■■■■□ 23
HDAC10-202ENST00000349505 NAB1Q13506 487 aa18.36■□□□□ 0.53
HDAC10-202ENST00000349505 ZNF449Q6P9G9 518 aa18.36■□□□□ 0.53
HDAC10-202ENST00000349505 LRRC49Q8IUZ0 686 aa18.36■□□□□ 0.53
HDAC10-202ENST00000349505 TTC9BQ8N6N2 239 aa18.36■□□□□ 0.53
HDAC10-202ENST00000349505 C10orf82Q8WW14 230 aa18.36■□□□□ 0.53
HDAC10-202ENST00000349505 ZNF75CPQ92670 426 aaPredicted RBP18.36■□□□□ 0.53
HDAC10-202ENST00000349505 SCLYQ96I15 445 aa18.36■□□□□ 0.53
HDAC10-202ENST00000349505 AGAP3Q96P47 875 aa18.36■□□□□ 0.53
HDAC10-202ENST00000349505 TRIM56Q9BRZ2 755 aaKnown RBP18.36■□□□□ 0.53
HDAC10-202ENST00000349505 TTPALQ9BTX7 342 aa18.36■□□□□ 0.53
HDAC10-202ENST00000349505 DONSONQ9NYP3 566 aa18.36■□□□□ 0.53
HDAC10-202ENST00000349505 GGT7Q9UJ14 662 aa18.36■□□□□ 0.53
HDAC10-202ENST00000349505 GRID1Q9ULK0 1009 aa18.36■□□□□ 0.53
HDAC10-202ENST00000349505 STK38LQ9Y2H1 464 aa18.36■□□□□ 0.53
HDAC10-202ENST00000349505 SHROOM3Q8TF72 1996 aa18.36■□□□□ 0.53
HDAC10-202ENST00000349505 ARHGAP42A6NI28 874 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 WASH4PA8MWX3 477 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 TRIM49D1C9J1S8 452 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 E9PAM4 449 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 LPXNO60711 386 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 TGDSO95455 350 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 CSH1P0DML2 217 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 CSH2P0DML3 217 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 CNTFP26441 200 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 TBX4P57082 545 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 CMPK2Q5EBM0 449 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 RTP2Q5QGT7 225 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 KLHDC8BQ8IXV7 354 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 ATPAF2Q8N5M1 289 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 STKLD1Q8NE28 680 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 CDKL2Q92772 493 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 FBXO32Q969P5 355 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 CASS4Q9NQ75 786 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 TLR8Q9NR97 1041 aaKnown RBP18.35■□□□□ 0.53
HDAC10-202ENST00000349505 HCSTQ9UBK5 93 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 CHKBQ9Y259 395 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 GOLGA8RI6L899 631 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 AP3B1O00203 1094 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 PSMD3O43242 534 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 CACNG3O60359 315 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 JCHAINP01591 159 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 POLBP06746 335 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 NFKB1P19838 968 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 TUBP50607 506 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 NEK3P51956 506 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 ARPP19P56211 112 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 PRPSAP1Q14558 356 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 RSPO2Q6UXX9 243 aaPredicted RBP18.35■□□□□ 0.53
HDAC10-202ENST00000349505 MARK2Q7KZI7 788 aaKnown RBP18.35■□□□□ 0.53
HDAC10-202ENST00000349505 RTL3Q8N8U3 475 aaKnown RBP18.35■□□□□ 0.53
HDAC10-202ENST00000349505 KLF6Q99612 283 aaPredicted RBP18.35■□□□□ 0.53
HDAC10-202ENST00000349505 RNF208Q9H0X6 261 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.35■□□□□ 0.53
HDAC10-202ENST00000349505 SYBUQ9NX95 663 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 BFARQ9NZS9 450 aa18.35■□□□□ 0.53
HDAC10-202ENST00000349505 NT5C1B-RDH14C9J2C7 533 aa18.34■□□□□ 0.53
HDAC10-202ENST00000349505 DFFAO00273 331 aa18.34■□□□□ 0.53
HDAC10-202ENST00000349505 MOCS2O96007 188 aaPredicted RBP18.34■□□□□ 0.53
HDAC10-202ENST00000349505 HAPLN1P10915 354 aaPredicted RBP18.34■□□□□ 0.53
HDAC10-202ENST00000349505 CCL5P13501 91 aa18.34■□□□□ 0.53
HDAC10-202ENST00000349505 PTPN4P29074 926 aa18.34■□□□□ 0.53
HDAC10-202ENST00000349505 CCL23P55773 120 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms