RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 SYNCRIPO60506 623 aaKnown RBP18.37■□□□□ 0.53
SMC4-201ENST00000344722 NOL4O94818 638 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 SLC2A3P11169 496 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 MLNP12872 115 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 TPH1P17752 444 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 PRDX6P30041 224 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 C6orf52Q5T4I8 152 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 DENND5AQ6IQ26 1287 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 ANO7Q6IWH7 933 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 C4orf32Q8N8J7 132 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 PEX11AO75192 247 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 RECQL5O94762 991 aaPredicted RBP18.37■□□□□ 0.53
SMC4-201ENST00000344722 MICAL2O94851 1124 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 NNMTP40261 264 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 SLC26A3P40879 764 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 SLC44A1Q8WWI5 657 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 TNFRSF25Q93038 417 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 SPASTQ9UBP0 616 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 PCDHB8Q9UN66 801 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 ERI2A8K979 691 aaKnown RBP18.37■□□□□ 0.53
SMC4-201ENST00000344722 CRHR1P34998 444 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 DGKKQ5KSL6 1271 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 RFWD3Q6PCD5 774 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 PTAR1Q7Z6K3 402 aaPredicted RBP18.37■□□□□ 0.53
SMC4-201ENST00000344722 C10orf107Q8IVU9 208 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 TTLL6Q8N841 843 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 SPOCK2Q92563 424 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 CERS2Q96G23 380 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 DYRK4Q9NR20 520 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 COQ6Q9Y2Z9 468 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 CPSF4O95639 269 aaKnown RBP18.36■□□□□ 0.53
SMC4-201ENST00000344722 CYP1A1P04798 512 aaPredicted RBP18.36■□□□□ 0.53
SMC4-201ENST00000344722 SUPT20HL2P0C7V6 817 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 NELFEP18615 380 aaKnown RBP18.36■□□□□ 0.53
SMC4-201ENST00000344722 HMGCS2P54868 508 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 KLF10Q13118 480 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 INO80DQ53TQ3 878 aaPredicted RBP18.36■□□□□ 0.53
SMC4-201ENST00000344722 ADGRD1Q6QNK2 874 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 RAB42Q8N4Z0 105 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 PROX1Q92786 737 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 RPRD1BQ9NQG5 326 aaKnown RBP18.36■□□□□ 0.53
SMC4-201ENST00000344722 PNPOQ9NVS9 261 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 PRKAG3Q9UGI9 489 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 SFMBT1Q9UHJ3 866 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 TRIM43BA6NCK2 446 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 PTGIRP43119 386 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 ZNF470Q6ECI4 717 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 RNFT2Q96EX2 444 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 CEP41Q9BYV8 373 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 TRIM8Q9BZR9 551 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 UBP1Q9NZI7 540 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 BARX2Q9UMQ3 279 aaPredicted RBP18.36■□□□□ 0.53
SMC4-201ENST00000344722 AMPD1P23109 780 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 CCNG1P51959 295 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 CNTN1Q12860 1018 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 PPIL2Q13356 520 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 LIPMQ5VYY2 423 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 TYW3Q6IPR3 259 aaKnown RBP18.36■□□□□ 0.53
SMC4-201ENST00000344722 SLCO6A1Q86UG4 719 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 FAM151AQ8WW52 585 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 MORF4L1Q9UBU8 362 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 DIP2AQ14689 1571 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 UPP2O95045 317 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 NADKO95544 446 aaPredicted RBP18.36■□□□□ 0.53
SMC4-201ENST00000344722 CRTAMO95727 393 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 GUCA1CO95843 209 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 HOXB8P17481 243 aaPredicted RBP18.36■□□□□ 0.53
SMC4-201ENST00000344722 ATP5F1P24539 256 aaPredicted RBP18.36■□□□□ 0.53
SMC4-201ENST00000344722 PEX2P28328 305 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 HAS1Q92839 578 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 CINPQ9BW66 212 aaPredicted RBP18.36■□□□□ 0.53
SMC4-201ENST00000344722 CDHR5Q9HBB8 845 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 NUDT5Q9UKK9 219 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 WASF2Q9Y6W5 498 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 A0A0A0MRY4 1105 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 LOC100506127A0A0U1RQW1 187 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 KRT6AP02538 564 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 CHI3L1P36222 383 aaPredicted RBP18.36■□□□□ 0.53
SMC4-201ENST00000344722 TWF1Q12792 350 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 CDC16Q13042 620 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 ELMO3Q96BJ8 720 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 SPATA13Q96N96 652 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 VAT1Q99536 393 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 FBXO28Q9NVF7 368 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 TSPAN16Q9UKR8 245 aa18.36■□□□□ 0.53
SMC4-201ENST00000344722 ATP13A4Q4VNC1 1196 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 ACSBG2Q5FVE4 666 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 TMEM132CQ8N3T6 1108 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 CCNB1IP1Q9NPC3 277 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 CPB1P15086 417 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 CSE1LP55060 971 aaKnown RBP18.35■□□□□ 0.53
SMC4-201ENST00000344722 AQP4P55087 323 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 PWP1Q13610 501 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 CHSY1Q86X52 802 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 ACP6Q9NPH0 428 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 RGS18Q9NS28 235 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 CRLS1Q9UJA2 301 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 LEF1Q9UJU2 399 aaPredicted RBP18.35■□□□□ 0.53
SMC4-201ENST00000344722 MYOM1P52179 1685 aa18.35■□□□□ 0.53
SMC4-201ENST00000344722 LSM3P62310 102 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms