RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ZMYM5Q9UJ78 669 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 EIF3LQ9Y262 564 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 SUPT7LO94864 414 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 MFSD5Q6N075 450 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 DNAJB7Q7Z6W7 309 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 TMEM192Q8IY95 271 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 ZSWIM2Q8NEG5 633 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 OR8D1Q8WZ84 308 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 ARL8AQ96BM9 186 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 CCDC138Q96M89 665 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 CCDC3Q9BQI4 270 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 MLPHQ9BV36 600 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 SPASTQ9UBP0 616 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 SLC24A2Q9UI40 661 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 PCDHB9Q9Y5E1 797 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 GRM6O15303 877 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 CLDN11O75508 207 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 TPGS2Q68CL5 300 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 SCARA3Q6AZY7 606 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 STRADAQ7RTN6 431 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 TRAPPC5Q8IUR0 188 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 PCED1BQ96HM7 432 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 DHX15O43143 795 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 HTR1BP28222 390 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 CACHD1Q5VU97 1274 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 GRASPQ7Z6J2 395 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 SGF29Q96ES7 293 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 C16orf70Q9BSU1 422 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 NLNQ9BYT8 704 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 WDR41Q9HAD4 459 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 BTAF1O14981 1849 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 HNRNPCL1O60812 293 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 CDK16Q00536 496 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 GRTP1Q5TC63 336 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 DIS3LQ8TF46 1054 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 TRMT61BQ9BVS5 477 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 MRPL1Q9BYD6 325 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 CDHR5Q9HBB8 845 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 MYO7AQ13402 2215 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 CHD4Q14839 1912 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 NCANO14594 1321 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 BTNL10A8MVZ5 291 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 KLHL2O95198 593 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 TIMP1P01033 207 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 MPOP05164 745 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 HPCAP84074 193 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 DAB2P98082 770 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 XRCC4Q13426 336 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 ABHD8Q96I13 439 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 FGFBP2Q9BYJ0 223 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 GPR88Q9GZN0 384 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 TAS2R13Q9NYV9 303 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 NAALADL1Q9UQQ1 740 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 TMEM120BA0PK00 339 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 TPH1P17752 444 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 ITGB6P18564 788 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 IRAK1BP1Q5VVH5 260 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 PSTKQ8IV42 348 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 ANKLE1Q8NAG6 615 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 MAGEC3Q8TD91 643 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 FCRL2Q96LA5 508 aaPredicted RBP16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 PPP1R36Q96LQ0 422 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 ILKAPQ9H0C8 392 aaPredicted RBP16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 MANSC1Q9H8J5 431 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 SETD1AO15047 1707 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 A0A0A0MRY4 1105 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 RNASEH2AO75792 299 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 RBL1P28749 1068 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 MDH1P40925 334 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 ANXA11P50995 505 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 NAB1Q13506 487 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 CUL3Q13618 768 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 KCNMB4Q86W47 210 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 ARMC2Q8NEN0 867 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 LNX1Q8TBB1 728 aaPredicted RBP16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 SPATA13Q96N96 652 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 RNF157Q96PX1 679 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 RUBCNLQ9H714 662 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 NRDE2Q9H7Z3 1164 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 WRAP73Q9P2S5 460 aaPredicted RBP16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 STXBP5LQ9Y2K9 1186 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 ASB3Q9Y575 518 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 TPBGLP0DKB5 382 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 PEX6Q13608 980 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 BOP1Q14137 746 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 INSCQ1MX18 579 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 C1orf146Q5VVC0 180 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 SLC22A9Q8IVM8 553 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 OR6K2Q8NGY2 324 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 OR2W6PQ8NHA6 318 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 GBP5Q96PP8 586 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 HNRNPABQ99729 332 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 TAS2R14Q9NYV8 317 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 FLRT1Q9NZU1 646 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 MPP6Q9NZW5 540 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 ARL2BPQ9Y2Y0 163 aa16.69■□□□□ 0.26
SMARCA4-201ENST00000344626 BMP6P22004 513 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 HSD17B3P37058 310 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 DGKEP52429 567 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms