RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 KCNA4P22459 653 aa16.51■□□□□ 0.23
ATG4B-201ENST00000344376 OR1E1P30953 314 aa16.51■□□□□ 0.23
ATG4B-201ENST00000344376 VASPP50552 380 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-201ENST00000344376 ELAVL3Q14576 367 aaKnown RBP16.51■□□□□ 0.23
ATG4B-201ENST00000344376 CST6Q15828 149 aa16.51■□□□□ 0.23
ATG4B-201ENST00000344376 ACCSLQ4AC99 568 aa16.51■□□□□ 0.23
ATG4B-201ENST00000344376 PPM1JQ5JR12 505 aa16.51■□□□□ 0.23
ATG4B-201ENST00000344376 DCAF12L1Q5VU92 463 aa16.51■□□□□ 0.23
ATG4B-201ENST00000344376 ACAD10Q6JQN1 1059 aa16.51■□□□□ 0.23
ATG4B-201ENST00000344376 TFAP2DQ7Z6R9 452 aa16.51■□□□□ 0.23
ATG4B-201ENST00000344376 DSG4Q86SJ6 1040 aa16.51■□□□□ 0.23
ATG4B-201ENST00000344376 MMAAQ8IVH4 418 aaKnown RBP16.51■□□□□ 0.23
ATG4B-201ENST00000344376 FAM172AQ8WUF8 416 aa16.51■□□□□ 0.23
ATG4B-201ENST00000344376 EDEM3Q9BZQ6 932 aa16.51■□□□□ 0.23
ATG4B-201ENST00000344376 ZYG11BQ9C0D3 744 aa16.51■□□□□ 0.23
ATG4B-201ENST00000344376 MIR1-1HGQ9H1L0 117 aa16.51■□□□□ 0.23
ATG4B-201ENST00000344376 TMPRSS4Q9NRS4 437 aa16.51■□□□□ 0.23
ATG4B-201ENST00000344376 MPP6Q9NZW5 540 aa16.51■□□□□ 0.23
ATG4B-201ENST00000344376 CACNA1AO00555 2505 aa16.51■□□□□ 0.23
ATG4B-201ENST00000344376 ADH1BP00325 375 aa16.5■□□□□ 0.23
ATG4B-201ENST00000344376 SYPP08247 313 aa16.5■□□□□ 0.23
ATG4B-201ENST00000344376 RFC1P35251 1148 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-201ENST00000344376 ADRA1BP35368 520 aa16.5■□□□□ 0.23
ATG4B-201ENST00000344376 MAPK8P45983 427 aa16.5■□□□□ 0.23
ATG4B-201ENST00000344376 FANCCQ00597 558 aa16.5■□□□□ 0.23
ATG4B-201ENST00000344376 NR1I3Q14994 352 aa16.5■□□□□ 0.23
ATG4B-201ENST00000344376 DCUN1D2Q6PH85 259 aa16.5■□□□□ 0.23
ATG4B-201ENST00000344376 OR52K2Q8NGK3 314 aa16.5■□□□□ 0.23
ATG4B-201ENST00000344376 DNASE2BQ8WZ79 361 aa16.5■□□□□ 0.23
ATG4B-201ENST00000344376 SNX19Q92543 992 aa16.5■□□□□ 0.23
ATG4B-201ENST00000344376 ALG14Q96F25 216 aa16.5■□□□□ 0.23
ATG4B-201ENST00000344376 OMDQ99983 421 aa16.5■□□□□ 0.23
ATG4B-201ENST00000344376 CAPN10Q9HC96 672 aa16.5■□□□□ 0.23
ATG4B-201ENST00000344376 FBXL12Q9NXK8 326 aa16.5■□□□□ 0.23
ATG4B-201ENST00000344376 PPARGC1AQ9UBK2 798 aaKnown RBP16.5■□□□□ 0.23
ATG4B-201ENST00000344376 OR51B4Q9Y5P0 310 aa16.5■□□□□ 0.23
ATG4B-201ENST00000344376 TNRC6BQ9UPQ9 1833 aaKnown RBP16.5■□□□□ 0.23
ATG4B-201ENST00000344376 A0A1B0GTW7 788 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 MID1O15344 667 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 MAOBP27338 520 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 ACSL1P33121 698 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 PSMD8P48556 350 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 UAP1L1Q3KQV9 507 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 ZSCAN23Q3MJ62 389 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 WDR59Q6PJI9 974 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 ZNF783Q6ZMS7 281 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 MCOLN2Q8IZK6 566 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 STK40Q8N2I9 435 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 DCAF4L2Q8NA75 395 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 OR8D1Q8WZ84 308 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 CENPIQ92674 756 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-201ENST00000344376 PTPRN2Q92932 1015 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 VCPIP1Q96JH7 1222 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 CCDC114Q96M63 670 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 MCEEQ96PE7 176 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 GTPBP2Q9BX10 602 aaKnown RBP16.49■□□□□ 0.23
ATG4B-201ENST00000344376 OSBPL2Q9H1P3 480 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 AIPL1Q9NZN9 384 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 OR12D3Q9UGF7 316 aa16.49■□□□□ 0.23
ATG4B-201ENST00000344376 DNAH14Q0VDD8 3507 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 MED19A0JLT2 244 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-201ENST00000344376 ILVBLA1L0T0 632 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 ATP9BO43861 1147 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 RNASEH2AO75792 299 aaKnown RBP16.48■□□□□ 0.23
ATG4B-201ENST00000344376 IL1BP01584 269 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 C5AR1P21730 350 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 SLC8A1P32418 973 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 ZNF143P52747 638 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-201ENST00000344376 HDAC4P56524 1084 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 UBASH3AP57075 661 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 NRG1Q02297 640 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-201ENST00000344376 KLHL30Q0D2K2 578 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 FIGNQ5HY92 759 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 SH3PXD2AQ5TCZ1 1133 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 ZCCHC9Q8N567 271 aaKnown RBP16.48■□□□□ 0.23
ATG4B-201ENST00000344376 SH2D3CQ8N5H7 860 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 NTAN1Q96AB6 310 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 SYT11Q9BT88 431 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 HAUS4Q9H6D7 363 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 C6orf106Q9H6K1 298 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-201ENST00000344376 RETREG1Q9H6L5 497 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 VPS51Q9UID3 782 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 FZD4Q9ULV1 537 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 HS3ST2Q9Y278 367 aa16.48■□□□□ 0.23
ATG4B-201ENST00000344376 FARP1Q9Y4F1 1045 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-201ENST00000344376 A0A1W2PP55 124 aa16.47■□□□□ 0.23
ATG4B-201ENST00000344376 LRRC72A6NJI9 287 aa16.47■□□□□ 0.23
ATG4B-201ENST00000344376 TMCO5BA8MYB1 307 aa16.47■□□□□ 0.23
ATG4B-201ENST00000344376 ARHGAP33O14559 1287 aa16.47■□□□□ 0.23
ATG4B-201ENST00000344376 CDX4O14627 284 aaPredicted RBP16.47■□□□□ 0.23
ATG4B-201ENST00000344376 TM4SF5O14894 197 aa16.47■□□□□ 0.23
ATG4B-201ENST00000344376 RRM1P23921 792 aa16.47■□□□□ 0.23
ATG4B-201ENST00000344376 ETFBP38117 255 aa16.47■□□□□ 0.23
ATG4B-201ENST00000344376 PRKCIP41743 596 aa16.47■□□□□ 0.23
ATG4B-201ENST00000344376 DLG2Q15700 870 aa16.47■□□□□ 0.23
ATG4B-201ENST00000344376 EFHC2Q5JST6 749 aa16.47■□□□□ 0.23
ATG4B-201ENST00000344376 FAM46CQ5VWP2 391 aa16.47■□□□□ 0.23
ATG4B-201ENST00000344376 RWDD4Q6NW29 188 aaKnown RBP16.47■□□□□ 0.23
ATG4B-201ENST00000344376 HDDC3Q8N4P3 179 aa16.47■□□□□ 0.23
ATG4B-201ENST00000344376 ATP11CQ8NB49 1132 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms