RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 ATF6P18850 670 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 TGM2P21980 687 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 RDXP35241 583 aaKnown RBP13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 CACNA2D1P54289 1103 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 AIF1P55008 147 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 OTUD4Q01804 1114 aaKnown RBP13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 GRSF1Q12849 480 aaKnown RBP eCLIP13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 RUNX3Q13761 415 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 HSP90B2PQ58FF3 399 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 DCAF6Q58WW2 860 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 PM20D1Q6GTS8 502 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 TCEAL6Q6IPX3 200 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 BEND5Q7L4P6 421 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 GPRIN1Q7Z2K8 1008 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 LRRTM3Q86VH5 581 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 ALLCQ8N6M5 410 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 KDF1Q8NAX2 398 aaPredicted RBP13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 TSEN2Q8NCE0 465 aaKnown RBP13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 SLC35B2Q8TB61 432 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 ART4Q93070 314 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 TCEAL3Q969E4 200 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 FAF2Q96CS3 445 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 RNF157Q96PX1 679 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 RUFY1Q96T51 708 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 KCNK16Q96T55 309 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 EDEM2Q9BV94 578 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 TMEM121BQ9BXQ6 578 aaPredicted RBP13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 SLC46A2Q9BY10 475 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 PRDM16Q9HAZ2 1276 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 GKN1Q9NS71 199 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 RCOR3Q9P2K3 495 aaPredicted RBP13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 DNPEPQ9ULA0 475 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 ZMIZ1Q9ULJ6 1067 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 AP4E1Q9UPM8 1137 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 NEU2Q9Y3R4 380 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 CACNA1GO43497 2377 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 LAMA1P25391 3075 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 CAPN9O14815 690 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 MCF2LO15068 1137 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 RNF40O75150 1001 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 EGFP01133 1207 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 TFE3P19532 575 aaPredicted RBP13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 ITIH2P19823 946 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 TUFMP49411 452 aaKnown RBP13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 DYNLT1P63172 113 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 NOMO1Q15155 1222 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 SLC39A12Q504Y0 691 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 OTUD1Q5VV17 481 aaPredicted RBP13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 VSTM1Q6UX27 236 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 ZDHHC24Q6UX98 284 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 GSTA5Q7RTV2 222 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 TMC3Q7Z5M5 1100 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 CMTM8Q8IZV2 173 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 ACTL9Q8TC94 416 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 FBXO25Q8TCJ0 367 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 PGAP3Q96FM1 320 aaPredicted RBP13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 TSPYL1Q9H0U9 437 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 SMG9Q9H0W8 520 aaKnown RBP13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 PCDH9Q9HC56 1237 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 ZNF148Q9UQR1 794 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 USP3Q9Y6I4 520 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 CEP295Q9C0D2 2601 aa13.89□□□□□ -0.19
HERPUD1-202ENST00000344114 CHD5Q8TDI0 1954 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 BCLAF3A2AJT9 711 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 YJEFN3A6XGL0 299 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 E7ENQ6 273 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 APOL1O14791 398 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 TRIM66O15016 1216 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 PPFIA2O75334 1257 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 KRT14P02533 472 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 USP17L7P0C7H9 530 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 ZFXP17010 805 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 MAGEA11P43364 429 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 NOVA1P51513 510 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 PLTPP55058 493 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 DEUP1Q05D60 604 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 SMARCB1Q12824 385 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 COL9A2Q14055 689 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 VEPH1Q14D04 833 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 ANKRD20A8PQ5CZ79 823 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 ZC3H12AQ5D1E8 599 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 CFAP58Q5T655 872 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 SLC9A4Q6AI14 798 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 TRIM68Q6AZZ1 485 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 BHLHA9Q7RTU4 235 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 TMEM150AQ86TG1 271 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 NDRG1Q92597 394 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 NTAN1Q96AB6 310 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 HAUS1Q96CS2 278 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 PKNOX2Q96KN3 472 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 GCNAQ96QF7 691 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 HHIPQ96QV1 700 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 SEPT5Q99719 369 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 FAM118BQ9BPY3 351 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 ADAM33Q9BZ11 813 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 EBF3Q9H4W6 596 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 DHX35Q9H5Z1 703 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 KIF9Q9HAQ2 790 aa13.88□□□□□ -0.19
HERPUD1-202ENST00000344114 FBRSL1Q9HCM7 1045 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms