RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 GCLMP48507 274 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 PSMD8P48556 350 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 MCCD1P59942 119 aaPredicted RBP8.29□□□□□ -1.08
ATG4A-201ENST00000343524 ABCE1P61221 599 aaKnown RBP8.29□□□□□ -1.08
ATG4A-201ENST00000343524 RHDQ02161 417 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 PPP3CAQ08209 521 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 EIF2B5Q13144 721 aaKnown RBP8.29□□□□□ -1.08
ATG4A-201ENST00000343524 PMS2P3Q13401 168 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 NAB1Q13506 487 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 KRR1Q13601 381 aaKnown RBP8.29□□□□□ -1.08
ATG4A-201ENST00000343524 MAPRE1Q15691 268 aaKnown RBP8.29□□□□□ -1.08
ATG4A-201ENST00000343524 INSCQ1MX18 579 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 AASDHQ4L235 1098 aaPredicted RBP8.29□□□□□ -1.08
ATG4A-201ENST00000343524 MSS51Q4VC12 460 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 NHSL2Q5HYW2 709 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 ATAD3BQ5T9A4 648 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 C4orf22Q6V702 233 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 C16orf86Q6ZW13 317 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 POLNQ7Z5Q5 900 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 GPC2Q8N158 579 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 MYO1HQ8N1T3 1032 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 AFAP1L2Q8N4X5 818 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 OR13F1Q8NGS4 319 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 ZNF384Q8TF68 577 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 VMP1Q96GC9 406 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 NACC1Q96RE7 527 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 WDR83Q9BRX9 315 aaKnown RBP8.29□□□□□ -1.08
ATG4A-201ENST00000343524 TMEM121Q9BTD3 319 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 TRIM15Q9C019 465 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 C12orf10Q9HB07 376 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 NPDC1Q9NQX5 325 aaPredicted RBP8.29□□□□□ -1.08
ATG4A-201ENST00000343524 RABL2AQ9UBK7 228 aaPredicted RBP8.29□□□□□ -1.08
ATG4A-201ENST00000343524 NXF1Q9UBU9 619 aaKnown RBP8.29□□□□□ -1.08
ATG4A-201ENST00000343524 MID2Q9UJV3 735 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 FBXO9Q9UK97 447 aaPredicted RBP8.29□□□□□ -1.08
ATG4A-201ENST00000343524 TRAF6Q9Y4K3 522 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 PCDHGA11Q9Y5H2 935 aa8.29□□□□□ -1.08
ATG4A-201ENST00000343524 A0A1B0GTW7 788 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 FAM170AA1A519 330 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 PSMD11O00231 422 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 MEIS1O00470 390 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 ACOT8O14734 319 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 TLR3O15455 904 aaKnown RBP8.28□□□□□ -1.08
ATG4A-201ENST00000343524 PAPSS1O43252 624 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-201ENST00000343524 TMEM63AO94886 807 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 ALX3O95076 343 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 FGF3P11487 239 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-201ENST00000343524 BMP2P12643 396 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 GABRB3P28472 473 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 RCVRNP35243 200 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 STAT3P40763 770 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 HLCSP50747 726 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 CDH15P55291 814 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 PSMC6P62333 389 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 BASP1P80723 227 aaKnown RBP8.28□□□□□ -1.08
ATG4A-201ENST00000343524 CTBSQ01459 385 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 FCHO2Q0JRZ9 810 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 TRIM32Q13049 653 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 SELPLGQ14242 412 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 MAPRE2Q15555 327 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 ODR4Q5SWX8 454 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 GPATCH4Q5T3I0 446 aaKnown RBP8.28□□□□□ -1.08
ATG4A-201ENST00000343524 ANKRD22Q5VYY1 191 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 EPGNQ6UW88 154 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 MFSD7Q6UXD7 560 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 TMC5Q6UXY8 1006 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 KCTD8Q6ZWB6 473 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 USP43Q70EL4 1123 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 SNX32Q86XE0 403 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 LACC1Q8IV20 430 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 ESX1Q8N693 406 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 FEZF2Q8TBJ5 459 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 TTC9Q92623 222 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 SH3YL1Q96HL8 342 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-201ENST00000343524 ZNF778Q96MU6 729 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 ACCSQ96QU6 501 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 C9orf16Q9BUW7 83 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 ADI1Q9BV57 179 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 COL25A1Q9BXS0 654 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-201ENST00000343524 SHCBP1LQ9BZQ2 653 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 NANOGQ9H9S0 305 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 TMEM8AQ9HCN3 771 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 TCF7L2Q9NQB0 619 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 ZNRF3Q9ULT6 936 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 AGTPBP1Q9UPW5 1226 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 USTQ9Y2C2 406 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 ZBTB1Q9Y2K1 713 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 COQ4Q9Y3A0 265 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 TESMINQ9Y4I5 508 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 PCDHB12Q9Y5F1 795 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 CORINQ9Y5Q5 1042 aa8.28□□□□□ -1.08
ATG4A-201ENST00000343524 MN1Q10571 1320 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-201ENST00000343524 LOC105371267A0A1B0GV96 52 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 ARHGEF35A5YM69 484 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 KPNA7A9QM74 516 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 SLCO1B7G3V0H7 640 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 FZD9O00144 591 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 SNAP23O00161 211 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 ZBTB5O15062 677 aa8.27□□□□□ -1.09
ATG4A-201ENST00000343524 DYRK3O43781 588 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms