RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 RNASE9P60153 205 aaKnown RBP11.66□□□□□ -0.54
ATXN3-201ENST00000340660 NOP14P78316 857 aaKnown RBP11.66□□□□□ -0.54
ATXN3-201ENST00000340660 PPP2R3AQ06190 1150 aa11.66□□□□□ -0.54
ATXN3-201ENST00000340660 EIF4HQ15056 248 aaKnown RBP11.66□□□□□ -0.54
ATXN3-201ENST00000340660 NR0B2Q15466 257 aa11.66□□□□□ -0.54
ATXN3-201ENST00000340660 GPBAR1Q8TDU6 330 aa11.66□□□□□ -0.54
ATXN3-201ENST00000340660 PPP1R13BQ96KQ4 1090 aa11.66□□□□□ -0.54
ATXN3-201ENST00000340660 NSUN5Q96P11 429 aaKnown RBP11.66□□□□□ -0.54
ATXN3-201ENST00000340660 CCSER2Q9H7U1 834 aa11.66□□□□□ -0.54
ATXN3-201ENST00000340660 DDX43Q9NXZ2 648 aaKnown RBP11.66□□□□□ -0.54
ATXN3-201ENST00000340660 CLEC4EQ9ULY5 219 aa11.66□□□□□ -0.54
ATXN3-201ENST00000340660 TMX2-CTNND1H3BSU7 103 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 PRPF3O43395 683 aaKnown RBP11.65□□□□□ -0.54
ATXN3-201ENST00000340660 PENKP01210 267 aaPredicted RBP11.65□□□□□ -0.54
ATXN3-201ENST00000340660 CLTAP09496 248 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 XRCC6P12956 609 aaKnown RBP eCLIP11.65□□□□□ -0.54
ATXN3-201ENST00000340660 TAF6P49848 677 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 ADPRHP54922 357 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 EHHADHQ08426 723 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 POM121L1PQ3SYA9 428 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 C14orf28Q4W4Y0 310 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 FNDC3BQ53EP0 1204 aaKnown RBP11.65□□□□□ -0.54
ATXN3-201ENST00000340660 ZNF542PQ5EBM4 170 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 FYB2Q5VWT5 728 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 JADE1Q6IE81 842 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 SYNE3Q6ZMZ3 975 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 OSTM1Q86WC4 334 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 PDCL2Q8N4E4 241 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 CYB5D2Q8WUJ1 264 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 GOLGA1Q92805 767 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 GTF3C6Q969F1 213 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 PLD4Q96BZ4 506 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 IFT74Q96LB3 600 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 CDH19Q9H159 772 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 RSPH9Q9H1X1 276 aaPredicted RBP11.65□□□□□ -0.54
ATXN3-201ENST00000340660 NCKIPSDQ9NZQ3 722 aa11.65□□□□□ -0.54
ATXN3-201ENST00000340660 TARSL2A2RTX5 802 aaKnown RBP11.64□□□□□ -0.55
ATXN3-201ENST00000340660 FAM221AA4D161 298 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 GOLGA8AA7E2F4 631 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 GOLGA8BA8MQT2 603 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 MID1O15344 667 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 ZBTB43O43298 467 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 RNASEH2AO75792 299 aaKnown RBP11.64□□□□□ -0.55
ATXN3-201ENST00000340660 BDNFP23560 247 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 ART1P52961 327 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 RAD51AP2Q09MP3 1159 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 STAT4Q14765 748 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 ENOX2Q16206 610 aaKnown RBP11.64□□□□□ -0.55
ATXN3-201ENST00000340660 ECM1Q16610 540 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 BMT2Q1RMZ1 405 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 ANKRD45Q5TZF3 282 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 ZNF548Q8NEK5 533 aaPredicted RBP11.64□□□□□ -0.55
ATXN3-201ENST00000340660 CCDC148Q8NFR7 591 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 KLHDC7BQ96G42 594 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 CEP295NLQ96MC4 621 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 C22orf23Q9BZE7 217 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 MTG2Q9H4K7 406 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 CYP4F12Q9HCS2 524 aa11.64□□□□□ -0.55
ATXN3-201ENST00000340660 SLC12A8A0AV02 714 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 GRID2O43424 1007 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 TOM1L1O75674 476 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 ADRB2P07550 413 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 BPIP17213 487 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 CAPN3P20807 821 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 MAT2AP31153 395 aaKnown RBP11.63□□□□□ -0.55
ATXN3-201ENST00000340660 UGT1A3P35503 534 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 MCL1Q07820 350 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 IFRD2Q12894 506 aaPredicted RBP11.63□□□□□ -0.55
ATXN3-201ENST00000340660 E2F5Q15329 346 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 DEFB133Q30KQ1 61 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 HECTD3Q5T447 861 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 CEP135Q66GS9 1140 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 FAM171BQ6P995 826 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 VSTM1Q6UX27 236 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 PIK3AP1Q6ZUJ8 805 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 OR6B3Q8NGW1 331 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 PMEPA1Q969W9 287 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 TP53INP1Q96A56 240 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 C19orf60Q96EN9 201 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 SLITRK1Q96PX8 696 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 RANBP9Q96S59 729 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 ZMYND15Q9H091 742 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 EHD2Q9NZN4 543 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 LUZP4Q9P127 313 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 ARHGAP28Q9P2N2 729 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 SALL4Q9UJQ4 1053 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 TLK1Q9UKI8 766 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 FZD4Q9ULV1 537 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 TPX2Q9ULW0 747 aaKnown RBP11.63□□□□□ -0.55
ATXN3-201ENST00000340660 SCML1Q9UN30 329 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 L1RE1Q9UN81 338 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 MXRA5Q9NR99 2828 aa11.63□□□□□ -0.55
ATXN3-201ENST00000340660 TCHHQ07283 1943 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 POLEQ07864 2286 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 A0A1W2PQM1 296 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 KPNA7A9QM74 516 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 F8VP50 259 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 ZG16O60844 167 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 ATP2C2O75185 946 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 GUCY2CP25092 1073 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms