RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 RHOT1Q8IXI2 618 aa15.45■□□□□ 0.06
BRAT1-201ENST00000340611 AUTS2Q8WXX7 1259 aa15.45■□□□□ 0.06
BRAT1-201ENST00000340611 PKMYT1Q99640 499 aa15.45■□□□□ 0.06
BRAT1-201ENST00000340611 VN1R3Q9BXE9 311 aa15.45■□□□□ 0.06
BRAT1-201ENST00000340611 VPS37BQ9H9H4 285 aa15.45■□□□□ 0.06
BRAT1-201ENST00000340611 ALG13Q9NP73 1137 aaKnown RBP15.45■□□□□ 0.06
BRAT1-201ENST00000340611 PCDHB8Q9UN66 801 aa15.45■□□□□ 0.06
BRAT1-201ENST00000340611 MRPL42Q9Y6G3 142 aaKnown RBP15.45■□□□□ 0.06
BRAT1-201ENST00000340611 CFAP69A5D8W1 941 aa15.45■□□□□ 0.06
BRAT1-201ENST00000340611 EIF3FO00303 357 aaPredicted RBP15.45■□□□□ 0.06
BRAT1-201ENST00000340611 DYNLT1P63172 113 aa15.45■□□□□ 0.06
BRAT1-201ENST00000340611 PLCB3Q01970 1234 aa15.45■□□□□ 0.06
BRAT1-201ENST00000340611 FAM171BQ6P995 826 aa15.45■□□□□ 0.06
BRAT1-201ENST00000340611 C7orf61Q8IZ16 206 aa15.45■□□□□ 0.06
BRAT1-201ENST00000340611 THEM5Q8N1Q8 247 aa15.45■□□□□ 0.06
BRAT1-201ENST00000340611 CRISPLD1Q9H336 500 aa15.45■□□□□ 0.06
BRAT1-201ENST00000340611 DNAJC6O75061 913 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 PABPC4LP0CB38 370 aaKnown RBP15.44■□□□□ 0.06
BRAT1-201ENST00000340611 DSG1Q02413 1049 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 CAV1Q03135 178 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 PDK4Q16654 411 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 GSTA3Q16772 222 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 DCAF6Q58WW2 860 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 DEFB106AQ8N104 65 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 SIX6OS1Q8N1H7 587 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 FAM172AQ8WUF8 416 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 TOP1MTQ969P6 601 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 FAM124BQ9H5Z6 455 aaPredicted RBP15.44■□□□□ 0.06
BRAT1-201ENST00000340611 CWH43Q9H720 699 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 ACTL7BQ9Y614 415 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 PTPRSQ13332 1948 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 COL4A6Q14031 1691 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 GYG2O15488 501 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 BANF1O75531 89 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 DNAJB2P25686 324 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 GRIK1P39086 918 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 SLC1A1P43005 524 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 ALDH7A1P49419 539 aaKnown RBP15.44■□□□□ 0.06
BRAT1-201ENST00000340611 TSPY1Q01534 308 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 SLC25A11Q02978 314 aaKnown RBP15.44■□□□□ 0.06
BRAT1-201ENST00000340611 MMRN1Q13201 1228 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 PIGHQ14442 188 aaPredicted RBP15.44■□□□□ 0.06
BRAT1-201ENST00000340611 LRRN4Q8WUT4 740 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 C10orf88Q9H8K7 445 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.44■□□□□ 0.06
BRAT1-201ENST00000340611 MYO9BQ13459 2157 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 HHLA1C9JL84 531 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 KRT38O76015 456 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 TROVE2P10155 538 aaKnown RBP eCLIP15.44■□□□□ 0.06
BRAT1-201ENST00000340611 ETS1P14921 441 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 ZNF143P52747 638 aaPredicted RBP15.44■□□□□ 0.06
BRAT1-201ENST00000340611 MTM1Q13496 603 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 TMEM259Q4ZIN3 620 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 TMEM214Q6NUQ4 689 aaKnown RBP15.44■□□□□ 0.06
BRAT1-201ENST00000340611 PPP1R2P3Q6NXS1 205 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 LVRNQ6Q4G3 990 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 SYDE1Q6ZW31 735 aaPredicted RBP15.44■□□□□ 0.06
BRAT1-201ENST00000340611 SPATA2LQ8IUW3 424 aaPredicted RBP15.44■□□□□ 0.06
BRAT1-201ENST00000340611 LRRC43Q8N309 656 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 RFWD2Q8NHY2 731 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 GAB3Q8WWW8 586 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 SMARCD1Q96GM5 515 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 ECSITQ9BQ95 431 aa15.44■□□□□ 0.06
BRAT1-201ENST00000340611 TMA7Q9Y2S6 64 aaKnown RBP15.44■□□□□ 0.06
BRAT1-201ENST00000340611 PTPRDP23468 1912 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 MAP3K6O95382 1288 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 TFPTP0C1Z6 253 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 CPA2P48052 419 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 DCTN2Q13561 401 aaKnown RBP15.43■□□□□ 0.06
BRAT1-201ENST00000340611 CA9Q16790 459 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 SPRED2Q7Z698 418 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 CLNKQ7Z7G1 428 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 SLC7A5P1Q8MH63 180 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 CCDC89Q8N998 374 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 NETO2Q8NC67 525 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 ZNF75CPQ92670 426 aaPredicted RBP15.43■□□□□ 0.06
BRAT1-201ENST00000340611 PRR11Q96HE9 360 aaPredicted RBP15.43■□□□□ 0.06
BRAT1-201ENST00000340611 TBCBQ99426 244 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 KLF6Q99612 283 aaPredicted RBP15.43■□□□□ 0.06
BRAT1-201ENST00000340611 USP18Q9UMW8 372 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.43■□□□□ 0.06
BRAT1-201ENST00000340611 NEU2Q9Y3R4 380 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 A0A0G2JND7 137 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 GOLGA8RI6L899 631 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 KIAA0355O15063 1070 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 CPB1P15086 417 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 MAN1A1P33908 653 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 EMP3P54852 163 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 NAA20P61599 178 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 CCDC33Q8N5R6 958 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 RIN3Q8TB24 985 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 COLEC11Q9BWP8 271 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 MAK16Q9BXY0 300 aaKnown RBP15.43■□□□□ 0.06
BRAT1-201ENST00000340611 ARL8BQ9NVJ2 186 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 STX18Q9P2W9 335 aaKnown RBP15.43■□□□□ 0.06
BRAT1-201ENST00000340611 DSEQ9UL01 958 aa15.43■□□□□ 0.06
BRAT1-201ENST00000340611 FAF1Q9UNN5 650 aaPredicted RBP15.43■□□□□ 0.06
BRAT1-201ENST00000340611 RBMX2Q9Y388 322 aaKnown RBP15.43■□□□□ 0.06
BRAT1-201ENST00000340611 AMHP03971 560 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 ADRA1DP25100 572 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms