RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 MAPKAPK2P49137 400 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 TPI1P60174 286 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 CAMK2GQ13555 558 aaPredicted RBP15.64■□□□□ 0.09
UBE3B-201ENST00000340074 KCNT1Q5JUK3 1230 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 TXNRD3NBQ6F5E7 133 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 ZNF783Q6ZMS7 281 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 TMTC1Q8IUR5 882 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 OR7D4Q8NG98 312 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 GAB3Q8WWW8 586 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 NKD2Q969F2 451 aaPredicted RBP15.64■□□□□ 0.09
UBE3B-201ENST00000340074 MRGPRX1Q96LB2 322 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 KCTD15Q96SI1 283 aaPredicted RBP15.64■□□□□ 0.09
UBE3B-201ENST00000340074 MKRN2Q9H000 416 aaKnown RBP15.64■□□□□ 0.09
UBE3B-201ENST00000340074 EPC1Q9H2F5 836 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 SEMA4AQ9H3S1 761 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 MTG2Q9H4K7 406 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 RETREG1Q9H6L5 497 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 ZWILCHQ9H900 591 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 SLC25A13Q9UJS0 675 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 INTUQ9ULD6 942 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 INVSQ9Y283 1065 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 SHROOM3Q8TF72 1996 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 TTC34A8MYJ7 566 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 EIF3CLB5ME19 914 aaKnown RBP15.63■□□□□ 0.09
UBE3B-201ENST00000340074 EEF2KO00418 725 aaKnown RBP15.63■□□□□ 0.09
UBE3B-201ENST00000340074 SNAP91O60641 907 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 GLDCP23378 1020 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 MAGEA1P43355 309 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 COPAP53621 1224 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 KRT83P78385 493 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 SLC25A11Q02978 314 aaKnown RBP15.63■□□□□ 0.09
UBE3B-201ENST00000340074 GNA12Q03113 381 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 SIM2Q14190 667 aaPredicted RBP15.63■□□□□ 0.09
UBE3B-201ENST00000340074 SPA17Q15506 151 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 USP39Q53GS9 565 aaKnown RBP15.63■□□□□ 0.09
UBE3B-201ENST00000340074 BOLA3Q53S33 107 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 PPP6R3Q5H9R7 873 aaPredicted RBP15.63■□□□□ 0.09
UBE3B-201ENST00000340074 PRR23BQ6ZRT6 265 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 CPNE8Q86YQ8 564 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 PSTKQ8IV42 348 aaKnown RBP15.63■□□□□ 0.09
UBE3B-201ENST00000340074 RTL3Q8N8U3 475 aaKnown RBP15.63■□□□□ 0.09
UBE3B-201ENST00000340074 KDM1BQ8NB78 822 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 HSPH1Q92598 858 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 EIF3CQ99613 913 aaKnown RBP15.63■□□□□ 0.09
UBE3B-201ENST00000340074 C2orf49Q9BVC5 232 aaPredicted RBP15.63■□□□□ 0.09
UBE3B-201ENST00000340074 CATSPERBQ9H7T0 1116 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 PRSS16Q9NQE7 514 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 SUN2Q9UH99 717 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 VPS51Q9UID3 782 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 PCDHA13Q9Y5I0 950 aa15.63■□□□□ 0.09
UBE3B-201ENST00000340074 EPN1Q9Y6I3 576 aaPredicted RBP15.63■□□□□ 0.09
UBE3B-201ENST00000340074 TNRC6BQ9UPQ9 1833 aaKnown RBP15.63■□□□□ 0.09
UBE3B-201ENST00000340074 TMEM110-MUSTN1A8MSY1 372 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 DCLK1O15075 740 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 PROSCO94903 275 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 NDUFA10O95299 355 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 RARAP10276 462 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 GOT1P17174 413 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 HTR7P34969 479 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 ACVRL1P37023 503 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 NNMTP40261 264 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 SSR1P43307 286 aaKnown RBP15.62■□□□□ 0.09
UBE3B-201ENST00000340074 HNRNPA1L2Q32P51 320 aaKnown RBP15.62■□□□□ 0.09
UBE3B-201ENST00000340074 IL31Q6EBC2 164 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 KIAA1324Q6UXG2 1013 aaKnown RBP15.62■□□□□ 0.09
UBE3B-201ENST00000340074 CEP68Q76N32 757 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 CACUL1Q86Y37 369 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 TMPRSS6Q8IU80 811 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 RHOT2Q8IXI1 618 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 FRMD1Q8N878 549 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 DCAF4L2Q8NA75 395 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 SUMF1Q8NBK3 374 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 OR2T3Q8NH03 318 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 RLN3Q8WXF3 142 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 RFFLQ8WZ73 363 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 ARHGEF2Q92974 986 aaKnown RBP15.62■□□□□ 0.09
UBE3B-201ENST00000340074 BAG1Q99933 345 aaPredicted RBP15.62■□□□□ 0.09
UBE3B-201ENST00000340074 SPON2Q9BUD6 331 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 PRDM16Q9HAZ2 1276 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 ATP13A1Q9HD20 1204 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 CD93Q9NPY3 652 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.62■□□□□ 0.09
UBE3B-201ENST00000340074 NUMA1Q14980 2115 aa15.62■□□□□ 0.09
UBE3B-201ENST00000340074 ZFHX2Q9C0A1 2572 aaPredicted RBP15.62■□□□□ 0.09
UBE3B-201ENST00000340074 LAMA1P25391 3075 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 PRR23AA6NEV1 266 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 WASH4PA8MWX3 477 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 CBX4O00257 560 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 FGF10O15520 208 aaPredicted RBP15.61■□□□□ 0.09
UBE3B-201ENST00000340074 RAMP2O60895 175 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 SIN3BO75182 1162 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 MTA2O94776 668 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 MT-CO1P00395 513 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 LMNAP02545 664 aaKnown RBP15.61■□□□□ 0.09
UBE3B-201ENST00000340074 VAV1P15498 845 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 MESDQ14696 234 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 DPYSL2Q16555 572 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 LPAL2Q16609 132 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 ACCSLQ4AC99 568 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 LINGO4Q6UY18 593 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms