RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 TCRBV7S3A2A0A539 114 aa14.97□□□□□ -0.01
RET-201ENST00000340058 DDHD2O94830 711 aa14.97□□□□□ -0.01
RET-201ENST00000340058 TMEM63AO94886 807 aa14.97□□□□□ -0.01
RET-201ENST00000340058 NOVP48745 357 aa14.97□□□□□ -0.01
RET-201ENST00000340058 EPHB3P54753 998 aa14.97□□□□□ -0.01
RET-201ENST00000340058 TAF10Q12962 218 aa14.97□□□□□ -0.01
RET-201ENST00000340058 CRHR2Q13324 411 aa14.97□□□□□ -0.01
RET-201ENST00000340058 MAPRE2Q15555 327 aa14.97□□□□□ -0.01
RET-201ENST00000340058 ANKRD23Q86SG2 305 aa14.97□□□□□ -0.01
RET-201ENST00000340058 CIR1Q86X95 450 aaPredicted RBP14.97□□□□□ -0.01
RET-201ENST00000340058 SH3GL2Q99962 352 aa14.97□□□□□ -0.01
RET-201ENST00000340058 CHRAC1Q9NRG0 131 aa14.97□□□□□ -0.01
RET-201ENST00000340058 PKD2L2Q9NZM6 624 aa14.97□□□□□ -0.01
RET-201ENST00000340058 TRHDEQ9UKU6 1024 aa14.97□□□□□ -0.01
RET-201ENST00000340058 IRS2Q9Y4H2 1338 aa14.97□□□□□ -0.01
RET-201ENST00000340058 FAM95CA0A1B0GW59 222 aa14.97□□□□□ -0.01
RET-201ENST00000340058 PROCP04070 461 aa14.97□□□□□ -0.01
RET-201ENST00000340058 OTOAQ7RTW8 1153 aa14.97□□□□□ -0.01
RET-201ENST00000340058 DIS3LQ8TF46 1054 aaKnown RBP14.97□□□□□ -0.01
RET-201ENST00000340058 PIWIL1Q96J94 861 aaKnown RBP14.97□□□□□ -0.01
RET-201ENST00000340058 ALG9Q9H6U8 611 aa14.97□□□□□ -0.01
RET-201ENST00000340058 SIX4Q9UIU6 781 aa14.97□□□□□ -0.01
RET-201ENST00000340058 A0A1W2PQH9 124 aa14.96□□□□□ -0.01
RET-201ENST00000340058 MT-CYBP00156 380 aaPredicted RBP14.96□□□□□ -0.01
RET-201ENST00000340058 GRK2P25098 689 aa14.96□□□□□ -0.01
RET-201ENST00000340058 MSX2P35548 267 aaPredicted RBP14.96□□□□□ -0.01
RET-201ENST00000340058 CDH13P55290 713 aa14.96□□□□□ -0.01
RET-201ENST00000340058 MED21Q13503 144 aa14.96□□□□□ -0.01
RET-201ENST00000340058 NOL9Q5SY16 702 aaKnown RBP14.96□□□□□ -0.01
RET-201ENST00000340058 TMEM154Q6P9G4 183 aa14.96□□□□□ -0.01
RET-201ENST00000340058 RFWD3Q6PCD5 774 aa14.96□□□□□ -0.01
RET-201ENST00000340058 YAF2Q8IY57 180 aa14.96□□□□□ -0.01
RET-201ENST00000340058 UNC5BQ8IZJ1 945 aa14.96□□□□□ -0.01
RET-201ENST00000340058 R3HDMLQ9H3Y0 253 aa14.96□□□□□ -0.01
RET-201ENST00000340058 ARL5CA6NH57 179 aa14.96□□□□□ -0.01
RET-201ENST00000340058 ENTPD5O75356 428 aa14.96□□□□□ -0.01
RET-201ENST00000340058 KLRC2P26717 231 aa14.96□□□□□ -0.01
RET-201ENST00000340058 PTPN4P29074 926 aa14.96□□□□□ -0.01
RET-201ENST00000340058 ABL2P42684 1182 aa14.96□□□□□ -0.01
RET-201ENST00000340058 KLC1Q07866 573 aa14.96□□□□□ -0.01
RET-201ENST00000340058 ELAVL2Q12926 359 aaKnown RBP14.96□□□□□ -0.01
RET-201ENST00000340058 C11orf96Q7Z7L8 435 aa14.96□□□□□ -0.01
RET-201ENST00000340058 OR52K2Q8NGK3 314 aa14.96□□□□□ -0.01
RET-201ENST00000340058 NKD2Q969F2 451 aaPredicted RBP14.96□□□□□ -0.01
RET-201ENST00000340058 THUMPD3Q9BV44 507 aaKnown RBP14.96□□□□□ -0.01
RET-201ENST00000340058 ABCG8Q9H221 673 aa14.96□□□□□ -0.01
RET-201ENST00000340058 CNGB3Q9NQW8 809 aa14.96□□□□□ -0.01
RET-201ENST00000340058 ARHGEF4Q9NR80 690 aa14.96□□□□□ -0.01
RET-201ENST00000340058 THAP1Q9NVV9 213 aa14.96□□□□□ -0.01
RET-201ENST00000340058 ZNF197O14709 1029 aa14.96□□□□□ -0.02
RET-201ENST00000340058 LRIG2O94898 1065 aa14.96□□□□□ -0.02
RET-201ENST00000340058 ATP6V1G2O95670 118 aa14.96□□□□□ -0.02
RET-201ENST00000340058 CCDC166P0CW27 439 aa14.96□□□□□ -0.02
RET-201ENST00000340058 ATP5C1P36542 298 aaKnown RBP14.96□□□□□ -0.02
RET-201ENST00000340058 INHBEP58166 350 aa14.96□□□□□ -0.02
RET-201ENST00000340058 SLC25A3Q00325 362 aa14.96□□□□□ -0.02
RET-201ENST00000340058 SH3D19Q5HYK7 790 aa14.96□□□□□ -0.02
RET-201ENST00000340058 SNX32Q86XE0 403 aa14.96□□□□□ -0.02
RET-201ENST00000340058 CRYGNQ8WXF5 182 aa14.96□□□□□ -0.02
RET-201ENST00000340058 ACOX2Q99424 681 aa14.96□□□□□ -0.02
RET-201ENST00000340058 RRN3Q9NYV6 651 aa14.96□□□□□ -0.02
RET-201ENST00000340058 PCDHGC3Q9UN70 934 aa14.96□□□□□ -0.02
RET-201ENST00000340058 ITGA2BP08514 1039 aa14.95□□□□□ -0.02
RET-201ENST00000340058 HNRNPLP14866 589 aaKnown RBP eCLIP14.95□□□□□ -0.02
RET-201ENST00000340058 IL10P22301 178 aa14.95□□□□□ -0.02
RET-201ENST00000340058 GALNT3Q14435 633 aa14.95□□□□□ -0.02
RET-201ENST00000340058 ALYREFQ86V81 257 aaKnown RBP14.95□□□□□ -0.02
RET-201ENST00000340058 PGBD3Q8N328 593 aa14.95□□□□□ -0.02
RET-201ENST00000340058 DQX1Q8TE96 717 aaKnown RBP14.95□□□□□ -0.02
RET-201ENST00000340058 SNX27Q96L92 541 aa14.95□□□□□ -0.02
RET-201ENST00000340058 HACD1B0YJ81 288 aa14.95□□□□□ -0.02
RET-201ENST00000340058 UGT1A9O60656 530 aa14.95□□□□□ -0.02
RET-201ENST00000340058 HNRNPCL1O60812 293 aaKnown RBP14.95□□□□□ -0.02
RET-201ENST00000340058 TBX18O95935 607 aa14.95□□□□□ -0.02
RET-201ENST00000340058 CALB2P22676 271 aa14.95□□□□□ -0.02
RET-201ENST00000340058 CYP2R1Q6VVX0 501 aa14.95□□□□□ -0.02
RET-201ENST00000340058 HFE2Q6ZVN8 426 aa14.95□□□□□ -0.02
RET-201ENST00000340058 PCYOX1LQ8NBM8 494 aa14.95□□□□□ -0.02
RET-201ENST00000340058 ZSCAN18Q8TBC5 510 aaPredicted RBP14.95□□□□□ -0.02
RET-201ENST00000340058 TRIM15Q9C019 465 aa14.95□□□□□ -0.02
RET-201ENST00000340058 UGT1A7Q9HAW7 530 aa14.95□□□□□ -0.02
RET-201ENST00000340058 UGT1A10Q9HAW8 530 aa14.95□□□□□ -0.02
RET-201ENST00000340058 UGT1A8Q9HAW9 530 aa14.95□□□□□ -0.02
RET-201ENST00000340058 GMIPQ9P107 970 aa14.95□□□□□ -0.02
RET-201ENST00000340058 HOXA2O43364 376 aa14.95□□□□□ -0.02
RET-201ENST00000340058 WNT3AP56704 352 aa14.95□□□□□ -0.02
RET-201ENST00000340058 OLIG2Q13516 323 aa14.95□□□□□ -0.02
RET-201ENST00000340058 RNASEH2BQ5TBB1 312 aaKnown RBP14.95□□□□□ -0.02
RET-201ENST00000340058 GLT6D1Q7Z4J2 308 aa14.95□□□□□ -0.02
RET-201ENST00000340058 CXorf38Q8TB03 319 aa14.95□□□□□ -0.02
RET-201ENST00000340058 TBC1D13Q9NVG8 400 aa14.95□□□□□ -0.02
RET-201ENST00000340058 UXTQ9UBK9 157 aaPredicted RBP14.95□□□□□ -0.02
RET-201ENST00000340058 UBA2Q9UBT2 640 aaPredicted RBP14.95□□□□□ -0.02
RET-201ENST00000340058 ALS2Q96Q42 1657 aa14.95□□□□□ -0.02
RET-201ENST00000340058 HDCP19113 662 aa14.94□□□□□ -0.02
RET-201ENST00000340058 SERPINH1P50454 418 aaKnown RBP14.94□□□□□ -0.02
RET-201ENST00000340058 BOP1Q14137 746 aaKnown RBP14.94□□□□□ -0.02
RET-201ENST00000340058 PDK4Q16654 411 aa14.94□□□□□ -0.02
RET-201ENST00000340058 TIGD5Q53EQ6 642 aa14.94□□□□□ -0.02
RET-201ENST00000340058 ELMSAN1Q6PJG2 1045 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms