RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 ZNF667Q5HYK9 610 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 C4orf22Q6V702 233 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 GPR141Q7Z602 305 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 GPR180Q86V85 440 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 AKT1S1Q96B36 256 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 HEXIM2Q96MH2 286 aaKnown RBP20.56■□□□□ 0.88
UBC-201ENST00000339647 AGAP3Q96P47 875 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 TMEM134Q9H6X4 195 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 ZNF70Q9UC06 446 aaPredicted RBP20.56■□□□□ 0.88
UBC-201ENST00000339647 TRIM43BA6NCK2 446 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 TCAF2A6NFQ2 919 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 PSMD12O00232 456 aaPredicted RBP20.56■□□□□ 0.88
UBC-201ENST00000339647 CBFA2T3O75081 653 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 SUPT20HL2P0C7V6 817 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 TFE3P19532 575 aaPredicted RBP20.56■□□□□ 0.88
UBC-201ENST00000339647 GSTM4Q03013 218 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 GRM1Q13255 1194 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 OLIG2Q13516 323 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 SUPT20HL1Q3ZLR7 823 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 HEATR6Q6AI08 1181 aaKnown RBP20.56■□□□□ 0.88
UBC-201ENST00000339647 CPSF7Q8N684 471 aaKnown RBP20.56■□□□□ 0.88
UBC-201ENST00000339647 FAM47BQ8NA70 645 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 CLK4Q9HAZ1 481 aaKnown RBP20.56■□□□□ 0.88
UBC-201ENST00000339647 SLC38A7Q9NVC3 462 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 PPP1R1BQ9UD71 204 aaPredicted RBP20.56■□□□□ 0.88
UBC-201ENST00000339647 ZDHHC2Q9UIJ5 367 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 CPSF3Q9UKF6 684 aaKnown RBP20.56■□□□□ 0.88
UBC-201ENST00000339647 CTDP1Q9Y5B0 961 aaPredicted RBP20.56■□□□□ 0.88
UBC-201ENST00000339647 CNTNAP1P78357 1384 aa20.56■□□□□ 0.88
UBC-201ENST00000339647 A0A096LPK6 155 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 SERPINB7O75635 380 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 PIGNO95427 931 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 TFEBP19484 476 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 RPL14P50914 215 aaKnown RBP20.55■□□□□ 0.88
UBC-201ENST00000339647 PGGT1BP53609 377 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 SLCO4A1Q96BD0 722 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 TMEM176AQ96HP8 235 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 COX4I2Q96KJ9 171 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 FCRL3Q96P31 734 aaPredicted RBP20.55■□□□□ 0.88
UBC-201ENST00000339647 NOL11Q9H8H0 719 aaKnown RBP20.55■□□□□ 0.88
UBC-201ENST00000339647 ZBTB26Q9HCK0 441 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 C9IYK1 514 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 TRIM38O00635 465 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 OGTO15294 1046 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 MSCO60682 206 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 ATE1O95260 518 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 STAMBPO95630 424 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 TNNC2P02585 160 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 OATP04181 439 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 CKMT2P17540 419 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 CYP3A5P20815 502 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 GARSP41250 739 aaKnown RBP20.55■□□□□ 0.88
UBC-201ENST00000339647 TUBA4AP68366 448 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 SP2Q02086 613 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 BTG3Q14201 252 aaPredicted RBP20.55■□□□□ 0.88
UBC-201ENST00000339647 ARL13AQ5H913 290 aaPredicted RBP20.55■□□□□ 0.88
UBC-201ENST00000339647 GRAMD4Q6IC98 578 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 FSTL4Q6MZW2 842 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 AGAP2Q99490 1192 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 BCO2Q9BYV7 579 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 SELENONQ9NZV5 590 aa20.55■□□□□ 0.88
UBC-201ENST00000339647 SCAF8Q9UPN6 1271 aaKnown RBP20.55■□□□□ 0.88
UBC-201ENST00000339647 HTRA2O43464 458 aaPredicted RBP20.54■□□□□ 0.88
UBC-201ENST00000339647 BMP10O95393 424 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 ATXN1P54253 815 aaKnown RBP20.54■□□□□ 0.88
UBC-201ENST00000339647 COLGALT1Q8NBJ5 622 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 ACVR1CQ8NER5 493 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 VPS33BQ9H267 617 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 MORF4L1Q9UBU8 362 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 SIX4Q9UIU6 781 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 RAP2CQ9Y3L5 183 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 KPNA7A9QM74 516 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 H0YJX3 145 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 XPOTO43592 962 aaKnown RBP20.54■□□□□ 0.88
UBC-201ENST00000339647 TREML2Q5T2D2 321 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 HMBOX1Q6NT76 420 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 MAMDC4Q6UXC1 1216 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 CYP2R1Q6VVX0 501 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 ZPBP2Q6X784 338 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 STRA8Q7Z7C7 330 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 SETD3Q86TU7 594 aaPredicted RBP20.54■□□□□ 0.88
UBC-201ENST00000339647 HERC6Q8IVU3 1022 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 KCNN1Q92952 543 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 CERS2Q96G23 380 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 VPS50Q96JG6 964 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 QKIQ96PU8 341 aaKnown RBP eCLIP20.54■□□□□ 0.88
UBC-201ENST00000339647 LGMNQ99538 433 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 ZNF670Q9BS34 389 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 PDZD7Q9H5P4 517 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 NMRAL1Q9HBL8 299 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 ZNF302Q9NR11 478 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 DUS2Q9NX74 493 aaKnown RBP20.54■□□□□ 0.88
UBC-201ENST00000339647 SLC8A2Q9UPR5 921 aa20.54■□□□□ 0.88
UBC-201ENST00000339647 COPG1Q9Y678 874 aaKnown RBP20.54■□□□□ 0.88
UBC-201ENST00000339647 MAFGO15525 162 aa20.53■□□□□ 0.88
UBC-201ENST00000339647 RAD17O75943 681 aa20.53■□□□□ 0.88
UBC-201ENST00000339647 GABRB3P28472 473 aa20.53■□□□□ 0.88
UBC-201ENST00000339647 MAGEA12P43365 314 aa20.53■□□□□ 0.88
UBC-201ENST00000339647 MTA1Q13330 715 aa20.53■□□□□ 0.88
UBC-201ENST00000339647 GRTP1Q5TC63 336 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms