RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 PPP2R2BQ00005 443 aa12.87□□□□□ -0.35
DFFB-202ENST00000339350 CDKL1Q00532 357 aa12.87□□□□□ -0.35
DFFB-202ENST00000339350 TRIM71Q2Q1W2 868 aaKnown RBP12.87□□□□□ -0.35
DFFB-202ENST00000339350 DGLUCYQ7Z3D6 616 aa12.87□□□□□ -0.35
DFFB-202ENST00000339350 KIAA0319LQ8IZA0 1049 aa12.87□□□□□ -0.35
DFFB-202ENST00000339350 CCDC33Q8N5R6 958 aa12.87□□□□□ -0.35
DFFB-202ENST00000339350 PMEPA1Q969W9 287 aa12.87□□□□□ -0.35
DFFB-202ENST00000339350 CFAP36Q96G28 342 aa12.87□□□□□ -0.35
DFFB-202ENST00000339350 TBCBQ99426 244 aa12.87□□□□□ -0.35
DFFB-202ENST00000339350 C17orf80Q9BSJ5 609 aa12.87□□□□□ -0.35
DFFB-202ENST00000339350 DEFB129Q9H1M3 183 aa12.87□□□□□ -0.35
DFFB-202ENST00000339350 HACL1Q9UJ83 578 aa12.87□□□□□ -0.35
DFFB-202ENST00000339350 ZNF646O15015 1829 aaPredicted RBP12.87□□□□□ -0.35
DFFB-202ENST00000339350 STBD1O95210 358 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 MT-ND3P03897 115 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 ELK3P41970 407 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 HMGCS2P54868 508 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 CDH15P55291 814 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 NIPAL4Q0D2K0 466 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 MMRN1Q13201 1228 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 CARTPTQ16568 116 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 PERM1Q5SV97 790 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 KYAT3Q6YP21 454 aaKnown RBP12.86□□□□□ -0.35
DFFB-202ENST00000339350 CDHR3Q6ZTQ4 885 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 WDTC1Q8N5D0 677 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 DCAKDQ8WVC6 231 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 NTPCRQ9BSD7 190 aaKnown RBP12.86□□□□□ -0.35
DFFB-202ENST00000339350 SLC13A1Q9BZW2 595 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 CAAP1Q9H8G2 361 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 PLEKHA5Q9HAU0 1116 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 ARHGAP28Q9P2N2 729 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 NXF1Q9UBU9 619 aaKnown RBP12.86□□□□□ -0.35
DFFB-202ENST00000339350 RAB26Q9ULW5 256 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 PCM1Q15154 2024 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 CASQ2O14958 399 aaPredicted RBP12.86□□□□□ -0.35
DFFB-202ENST00000339350 RGS20O76081 388 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 PRDX6P30041 224 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 SFNP31947 248 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 BMPR1AP36894 532 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 C1QBPQ07021 282 aaKnown RBP12.86□□□□□ -0.35
DFFB-202ENST00000339350 EMC2Q15006 297 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 RALGPS1Q5JS13 557 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 NIPA1Q7RTP0 329 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 GALNT7Q86SF2 657 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 PRPF39Q86UA1 669 aaKnown RBP12.86□□□□□ -0.35
DFFB-202ENST00000339350 RFX6Q8HWS3 928 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 HACE1Q8IYU2 909 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 ARFGAP1Q8N6T3 406 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 BANPQ8N9N5 519 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 CIB1Q99828 191 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 SLC38A10Q9HBR0 1119 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 PCDH9Q9HC56 1237 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 POLMQ9NP87 494 aaPredicted RBP12.86□□□□□ -0.35
DFFB-202ENST00000339350 RNF146Q9NTX7 359 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 SLC24A2Q9UI40 661 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 SNTNA6NMZ2 147 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 KBTBD13C9JR72 458 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 KPNA4O00629 521 aaPredicted RBP12.86□□□□□ -0.35
DFFB-202ENST00000339350 CYB561D2O14569 222 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 DGAT1O75907 488 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 TOP3BO95985 862 aaKnown RBP12.86□□□□□ -0.35
DFFB-202ENST00000339350 DLDP09622 509 aaKnown RBP12.86□□□□□ -0.35
DFFB-202ENST00000339350 BAG6P46379 1132 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 CLK1P49759 484 aaKnown RBP12.86□□□□□ -0.35
DFFB-202ENST00000339350 P2RX3P56373 397 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 BMPR2Q13873 1038 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 DALRD3Q5D0E6 543 aaKnown RBP12.86□□□□□ -0.35
DFFB-202ENST00000339350 FGD3Q5JSP0 725 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 TCHHL1Q5QJ38 904 aaPredicted RBP12.86□□□□□ -0.35
DFFB-202ENST00000339350 TEPSINQ96N21 525 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 SENP1Q9P0U3 644 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 SHOC2Q9UQ13 582 aa12.86□□□□□ -0.35
DFFB-202ENST00000339350 FARP1Q9Y4F1 1045 aaPredicted RBP12.86□□□□□ -0.35
DFFB-202ENST00000339350 CAPN14A8MX76 684 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 F5H423 210 aaPredicted RBP12.85□□□□□ -0.35
DFFB-202ENST00000339350 TAF4O00268 1085 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 ACTR2P61160 394 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 B2MP61769 119 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 PGS1Q32NB8 556 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 UBE2UQ5VVX9 321 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 ADGRD1Q6QNK2 874 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 PPIL6Q8IXY8 311 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 ELMOD2Q8IZ81 293 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 MZB1Q8WU39 189 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 ZC3H15Q8WU90 426 aaKnown RBP12.85□□□□□ -0.35
DFFB-202ENST00000339350 DCPSQ96C86 337 aaKnown RBP12.85□□□□□ -0.35
DFFB-202ENST00000339350 SLC9A2Q9UBY0 812 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 TAGLN3Q9UI15 199 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 ST14Q9Y5Y6 855 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 H3BNX3 289 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 GIPC1O14908 333 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 MLLT3P42568 568 aaPredicted RBP12.85□□□□□ -0.35
DFFB-202ENST00000339350 PPM1LQ5SGD2 360 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 SH3PXD2AQ5TCZ1 1133 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 DENND1BQ6P3S1 775 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 SETD3Q86TU7 594 aaPredicted RBP12.85□□□□□ -0.35
DFFB-202ENST00000339350 IGFN1Q86VF2 1251 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 PPM1NQ8N819 430 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 TTC13Q8NBP0 860 aa12.85□□□□□ -0.35
DFFB-202ENST00000339350 ZNF486Q96H40 463 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms