RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 MMRN1Q13201 1228 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 DPYSQ14117 519 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 DPYSL3Q14195 570 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 PARP15Q460N3 678 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 ANKRD20A8PQ5CZ79 823 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 EOGTQ5NDL2 527 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 CWF19L1Q69YN2 538 aaKnown RBP12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 RETSATQ6NUM9 610 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 MAMSTRQ6ZN01 415 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 ZNF354CQ86Y25 554 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 REXO1L1PQ8IX06 675 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 CHPFQ8IZ52 775 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 SPEM1Q8N4L4 309 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 TRIM58Q8NG06 486 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 EXD1Q8NHP7 514 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 RPLP0P6Q8NHW5 317 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 TSC1Q92574 1164 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 EZH1Q92800 747 aaPredicted RBP12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 ACDQ96AP0 544 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 ALG14Q96F25 216 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 RBM41Q96IZ5 413 aaKnown RBP12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 RNF157Q96PX1 679 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 CHRDQ9H2X0 955 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 ATP13A1Q9HD20 1204 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 KLHL11Q9NVR0 708 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 THAP10Q9P2Z0 257 aaPredicted RBP12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 ZNF212Q9UDV6 495 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 SUN2Q9UH99 717 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 INTS6Q9UL03 887 aaKnown RBP12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 SLC8A2Q9UPR5 921 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 OR51B4Q9Y5P0 310 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 TTC28Q96AY4 2481 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 NCOR1O75376 2440 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 A0A0D9SEW6 157 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 ARHGAP42A6NI28 874 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 RASA4BC9J798 803 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 RASA4O43374 803 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 KLF8O95600 359 aaPredicted RBP12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 FTCDO95954 541 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 CD48P09326 243 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 NTSR1P30989 418 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 SERPINB6P35237 376 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 CXCL12P48061 93 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 COPS2P61201 443 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 TFDP2Q14188 446 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 RPS6KA1Q15418 735 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 FUT11Q495W5 492 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 FNDC3BQ53EP0 1204 aaKnown RBP12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 TMEM215Q68D42 235 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 CCDC50Q8IVM0 306 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 SFTPA1Q8IWL2 248 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 CCDC33Q8N5R6 958 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 ALLCQ8N6M5 410 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 DCAF4L2Q8NA75 395 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 KDM1BQ8NB78 822 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 OR7D4Q8NG98 312 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 OR52K2Q8NGK3 314 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 SORCS1Q8WY21 1168 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 ARHGEF2Q92974 986 aaKnown RBP12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 ACE2Q9BYF1 805 aaPredicted RBP12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 NDFIP2Q9NV92 336 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 SPATA6Q9NWH7 488 aaPredicted RBP12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 SLC25A13Q9UJS0 675 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 NEU3Q9UQ49 428 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 ERVW-1Q9UQF0 538 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 CAPN6Q9Y6Q1 641 aa12.2□□□□□ -0.46
SPTLC1-202ENST00000337841 CXorf51AA0A1B0GTR3 108 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 ZSCAN5CA6NGD5 496 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 CBX4O00257 560 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 DCLK1O15075 740 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 KDELR3O43731 214 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 KIF5CO60282 957 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 SYNCRIPO60506 623 aaKnown RBP12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 PEX5P50542 639 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 CCR3P51677 355 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 GEMIN4P57678 1058 aaKnown RBP12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 ZNF234Q14588 700 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 EGFLAMQ63HQ2 1017 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 MFSD7Q6UXD7 560 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 SERPINA13PQ6UXR4 307 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 SPOCD1Q6ZMY3 1216 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 BZW1Q7L1Q6 419 aaKnown RBP12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 RFX6Q8HWS3 928 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 LRRC49Q8IUZ0 686 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 TMEM105Q8N8V8 129 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 IL17RCQ8NAC3 791 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 DTWD2Q8NBA8 298 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 TXNDC5Q8NBS9 432 aaKnown RBP12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 PCDH19Q8TAB3 1148 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 CYB5D2Q8WUJ1 264 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 KRT35Q92764 455 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 FAF2Q96CS3 445 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 TRIM44Q96DX7 344 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 SLC39A8Q9C0K1 460 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 C11orf16Q9NQ32 467 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 DLGAP2Q9P1A6 1054 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 PYCARDQ9ULZ3 195 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 STON1Q9Y6Q2 735 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms