RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 COPS4Q9BT78 406 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 TOR3AQ9H497 397 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 SPAG4Q9NPE6 437 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 TRPM5Q9NZQ8 1165 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 SSR3Q9UNL2 185 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 ERGIC3Q9Y282 383 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 SPEF1Q9Y4P9 236 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 H3BMM5 538 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 SERPINA1P01009 418 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 LAMC1P11047 1609 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 ITGALP20701 1170 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 SP100P23497 879 aaPredicted RBP9.96□□□□□ -0.82
COL4A6-201ENST00000334504 RRP1BQ14684 758 aaKnown RBP9.96□□□□□ -0.82
COL4A6-201ENST00000334504 AAGABQ6PD74 315 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 POLNQ7Z5Q5 900 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 PTCD3Q96EY7 689 aaKnown RBP9.96□□□□□ -0.82
COL4A6-201ENST00000334504 ADGRL3Q9HAR2 1447 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 NOS1APO75052 506 aaPredicted RBP9.96□□□□□ -0.82
COL4A6-201ENST00000334504 SCGNO76038 276 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 RECQL5O94762 991 aaPredicted RBP9.96□□□□□ -0.82
COL4A6-201ENST00000334504 SNRPB2P08579 225 aaKnown RBP9.96□□□□□ -0.82
COL4A6-201ENST00000334504 PCSK1P29120 753 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 XIAPP98170 497 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 AUHQ13825 339 aaKnown RBP9.96□□□□□ -0.82
COL4A6-201ENST00000334504 IL27RAQ6UWB1 636 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 NUDT18Q6ZVK8 323 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 BHMTQ93088 406 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 APBA2Q99767 749 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 TBC1D13Q9NVG8 400 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 GIN1Q9NXP7 522 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 C3orf18Q9UK00 162 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 HPSEQ9Y251 543 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 RGS14O43566 566 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 PGK1P00558 417 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 CHRNGP07510 517 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 VDRP11473 427 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 QPCTQ16769 361 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 BHLHB9Q6PI77 547 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 ACOT1Q86TX2 421 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 DCP1BQ8IZD4 617 aaKnown RBP9.96□□□□□ -0.82
COL4A6-201ENST00000334504 FAM129BQ96TA1 746 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 MTMR12Q9C0I1 747 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 C12orf4Q9NQ89 552 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 MAN1C1Q9NR34 630 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 MLXQ9UH92 298 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 PLA2G4CQ9UP65 541 aa9.96□□□□□ -0.82
COL4A6-201ENST00000334504 A0A087X1B8 175 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 FADS2O95864 444 aaKnown RBP9.95□□□□□ -0.82
COL4A6-201ENST00000334504 ASS1P00966 412 aaKnown RBP9.95□□□□□ -0.82
COL4A6-201ENST00000334504 CST1P01037 141 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 IGFBP4P22692 258 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 EIF2S3P41091 472 aaKnown RBP9.95□□□□□ -0.82
COL4A6-201ENST00000334504 STARD3Q14849 445 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 MTX3Q5HYI7 312 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 TRIM48Q8IWZ4 208 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 REREQ9P2R6 1566 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 TRMUO75648 421 aaKnown RBP9.95□□□□□ -0.82
COL4A6-201ENST00000334504 TCEA3O75764 348 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 VAPBO95292 243 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 FGRP09769 529 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 UMPSP11172 480 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 MYL9P24844 172 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 GTF2E2P29084 291 aaKnown RBP9.95□□□□□ -0.82
COL4A6-201ENST00000334504 MED22Q15528 200 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 BICRALQ6AI39 1079 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 FBXO42Q6P3S6 717 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 ARMC8Q8IUR7 673 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 DNAJB14Q8TBM8 379 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 RXFP2Q8WXD0 754 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 MXRA8Q9BRK3 442 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 HGH1Q9BTY7 390 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 DNPEPQ9ULA0 475 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 TTC37Q6PGP7 1564 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 UMODL1Q5DID0 1318 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 CYP27B1O15528 508 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 OR6A2O95222 327 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 CYP4B1P13584 511 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 MUTP22033 750 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 KPNA1P52294 538 aaPredicted RBP9.95□□□□□ -0.82
COL4A6-201ENST00000334504 COPZ1P61923 177 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 CDH18Q13634 790 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 KCNA10Q16322 511 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 KCNV1Q6PIU1 500 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 FRMD7Q6ZUT3 714 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 FAM131BQ86XD5 332 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 CLEC10AQ8IUN9 316 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 CELF1Q92879 486 aaKnown RBP9.95□□□□□ -0.82
COL4A6-201ENST00000334504 USP7Q93009 1102 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 Q96MT0 163 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 S100A13Q99584 98 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 RGSL1A5PLK6 1076 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 IFRD1O00458 451 aaPredicted RBP9.95□□□□□ -0.82
COL4A6-201ENST00000334504 PRG2P13727 222 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 TBX2Q13207 712 aaPredicted RBP9.95□□□□□ -0.82
COL4A6-201ENST00000334504 BAATQ14032 418 aaPredicted RBP9.95□□□□□ -0.82
COL4A6-201ENST00000334504 ULK3Q6PHR2 472 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 ATG9AQ7Z3C6 839 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 FAM20CQ8IXL6 584 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 MEIOBQ8N635 442 aa9.95□□□□□ -0.82
COL4A6-201ENST00000334504 PIWIL2Q8TC59 973 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms