RNA–Protein interactions for RNA: ENST00000333877.8

NELFA-201, Transcript of negative elongation factor complex member A, humanhuman

TSL 2

Gene NELFA, Length 2,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-201ENST00000333877 PPARGC1AQ9UBK2 798 aaKnown RBP18.97■□□□□ 0.63
NELFA-201ENST00000333877 AFF4Q9UHB7 1163 aaKnown RBP18.97■□□□□ 0.63
NELFA-201ENST00000333877 CNTN5O94779 1100 aa18.97■□□□□ 0.63
NELFA-201ENST00000333877 TIMP1P01033 207 aa18.97■□□□□ 0.63
NELFA-201ENST00000333877 RHOQP17081 205 aa18.97■□□□□ 0.63
NELFA-201ENST00000333877 CYS1Q717R9 158 aa18.97■□□□□ 0.63
NELFA-201ENST00000333877 SLC39A11Q8N1S5 342 aa18.97■□□□□ 0.63
NELFA-201ENST00000333877 MAGEB18Q96M61 343 aa18.97■□□□□ 0.63
NELFA-201ENST00000333877 NAT9Q9BTE0 207 aa18.97■□□□□ 0.63
NELFA-201ENST00000333877 NOL6Q9H6R4 1146 aaKnown RBP18.97■□□□□ 0.63
NELFA-201ENST00000333877 CASS4Q9NQ75 786 aa18.97■□□□□ 0.63
NELFA-201ENST00000333877 SAMD15Q9P1V8 674 aa18.97■□□□□ 0.63
NELFA-201ENST00000333877 DOCK4Q8N1I0 1966 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.96■□□□□ 0.63
NELFA-201ENST00000333877 TRIM43BA6NCK2 446 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 ALDH1A2O94788 518 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 RING1Q06587 406 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 BTG3Q14201 252 aaPredicted RBP18.96■□□□□ 0.63
NELFA-201ENST00000333877 CRYMQ14894 314 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 SLC1A5Q15758 541 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 ALFQ53S48 1182 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 TIGD7Q6NT04 549 aaPredicted RBP18.96■□□□□ 0.63
NELFA-201ENST00000333877 FBXL22Q6P050 247 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 FBXO46Q6PJ61 603 aaPredicted RBP18.96■□□□□ 0.63
NELFA-201ENST00000333877 BANPQ8N9N5 519 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 ANKLE1Q8NAG6 615 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 ZNF461Q8TAF7 563 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 IGSF8Q969P0 613 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 TRIM43Q96BQ3 446 aaPredicted RBP18.96■□□□□ 0.63
NELFA-201ENST00000333877 ALKBH8Q96BT7 664 aaKnown RBP18.96■□□□□ 0.63
NELFA-201ENST00000333877 ZNF419Q96HQ0 510 aaPredicted RBP18.96■□□□□ 0.63
NELFA-201ENST00000333877 CEP295NLQ96MC4 621 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 ZNF512Q96ME7 567 aaPredicted RBP18.96■□□□□ 0.63
NELFA-201ENST00000333877 TGS1Q96RS0 853 aaKnown RBP18.96■□□□□ 0.63
NELFA-201ENST00000333877 IL12RB2Q99665 862 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 APOL2Q9BQE5 337 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 RC3H2Q9HBD1 1191 aaKnown RBP18.96■□□□□ 0.63
NELFA-201ENST00000333877 FNIP2Q9P278 1114 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 TRIM49D1C9J1S8 452 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 KRT37O76014 449 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 SNRPAP09012 282 aaKnown RBP18.96■□□□□ 0.63
NELFA-201ENST00000333877 DSG1Q02413 1049 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 LGSNQ5TDP6 509 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 LRRC49Q8IUZ0 686 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 CACNA2D3Q8IZS8 1091 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 UMODL1-AS1Q8N2C9 162 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 NSRP1Q9H0G5 558 aaKnown RBP18.96■□□□□ 0.63
NELFA-201ENST00000333877 LRRC40Q9H9A6 602 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 TMEM248Q9NWD8 314 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 BFARQ9NZS9 450 aa18.96■□□□□ 0.63
NELFA-201ENST00000333877 IPO11Q9UI26 975 aaKnown RBP18.96■□□□□ 0.63
NELFA-201ENST00000333877 IGLV3-10A0A075B6K4 115 aa18.95■□□□□ 0.62
NELFA-201ENST00000333877 ABLIM3O94929 683 aa18.95■□□□□ 0.62
NELFA-201ENST00000333877 ZWINTO95229 277 aa18.95■□□□□ 0.62
NELFA-201ENST00000333877 POLBP06746 335 aa18.95■□□□□ 0.62
NELFA-201ENST00000333877 WDR5P61964 334 aaKnown RBP18.95■□□□□ 0.62
NELFA-201ENST00000333877 SPATS2Q86XZ4 545 aaKnown RBP18.95■□□□□ 0.62
NELFA-201ENST00000333877 SPATA22Q8NHS9 363 aa18.95■□□□□ 0.62
NELFA-201ENST00000333877 TTC17Q96AE7 1141 aa18.95■□□□□ 0.62
NELFA-201ENST00000333877 CYP4F11Q9HBI6 524 aa18.95■□□□□ 0.62
NELFA-201ENST00000333877 CACNG3O60359 315 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 FOXN2P32314 431 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 ATP5C1P36542 298 aaKnown RBP18.94■□□□□ 0.62
NELFA-201ENST00000333877 KCNQ1P51787 676 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 KPNA1P52294 538 aaPredicted RBP18.94■□□□□ 0.62
NELFA-201ENST00000333877 NDST2P52849 883 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 HHATQ5VTY9 493 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 CES3Q6UWW8 571 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 MICALCLQ6ZW33 695 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 TCP10LQ8TDR4 215 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 ARMC5Q96C12 935 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 RPRD1AQ96P16 312 aaPredicted RBP18.94■□□□□ 0.62
NELFA-201ENST00000333877 CDK5RAP1Q96SZ6 601 aaKnown RBP18.94■□□□□ 0.62
NELFA-201ENST00000333877 GLOD4Q9HC38 313 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 FGFR1OP2Q9NVK5 253 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 RBM22Q9NW64 420 aaKnown RBP eCLIP18.94■□□□□ 0.622e-8■■■■■ 44.3
NELFA-201ENST00000333877 DNMT3LQ9UJW3 386 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 GRID1Q9ULK0 1009 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 RPS6KL1Q9Y6S9 549 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 FAM169AQ9Y6X4 670 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 MKI67P46013 3256 aaKnown RBP18.94■□□□□ 0.62
NELFA-201ENST00000333877 GOLGA6L7A0A1B0GV03 622 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 PSMD3O43242 534 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 ACRP10323 421 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 PYGBP11216 843 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 SF3A3Q12874 501 aaKnown RBP eCLIP18.94■□□□□ 0.626e-6■■■■□ 22.1
NELFA-201ENST00000333877 BMPR2Q13873 1038 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 NAPEPLDQ6IQ20 393 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 LVRNQ6Q4G3 990 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 SH2D5Q6ZV89 423 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 PIGWQ7Z7B1 504 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 CHSY1Q86X52 802 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 PDZD8Q8NEN9 1154 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 FCRL5Q96RD9 977 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 ELAC2Q9BQ52 826 aaKnown RBP18.94■□□□□ 0.62
NELFA-201ENST00000333877 HERC2P3Q9BVR0 1158 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 NACA2Q9H009 215 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 DONSONQ9NYP3 566 aa18.94■□□□□ 0.62
NELFA-201ENST00000333877 AAR2Q9Y312 384 aaKnown RBP18.94■□□□□ 0.62
NELFA-201ENST00000333877 KRT38O76015 456 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms