RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 MUTP22033 750 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 PDK2Q15119 407 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 FAM98BQ52LJ0 330 aaKnown RBP10.74□□□□□ -0.69
CLN8-201ENST00000331222 LRIG3Q6UXM1 1119 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 DAW1Q8N136 415 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 HELQQ8TDG4 1101 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 C19orf60Q96EN9 201 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 TRNT1Q96Q11 434 aaKnown RBP10.74□□□□□ -0.69
CLN8-201ENST00000331222 PDCD10Q9BUL8 212 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 SPATA31A1Q5TZJ5 1347 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 TRAV19A0A0A6YYK7 116 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 DDTLA6NHG4 134 aaPredicted RBP10.74□□□□□ -0.69
CLN8-201ENST00000331222 GSTM5P46439 218 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 ACVR2BQ13705 512 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 CRTC3Q6UUV7 619 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 REXO5Q96IC2 774 aaKnown RBP10.74□□□□□ -0.69
CLN8-201ENST00000331222 ISCUQ9H1K1 167 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 DDX18Q9NVP1 670 aaKnown RBP10.74□□□□□ -0.69
CLN8-201ENST00000331222 TUBGCP4Q9UGJ1 667 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 UBDO15205 165 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 SCN2BO60939 215 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 IFNA14P01570 189 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 CYP2A6P11509 494 aaPredicted RBP10.74□□□□□ -0.69
CLN8-201ENST00000331222 ARMC12Q5T9G4 340 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 OLFML2AQ68BL7 652 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 AADACL2Q6P093 401 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 SERPINA13PQ6UXR4 307 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 GALNTL5Q7Z4T8 443 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 ALLCQ8N6M5 410 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 TC2NQ8N9U0 490 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 ATP8B4Q8TF62 1192 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 TECPR2O15040 1411 aa10.74□□□□□ -0.69
CLN8-201ENST00000331222 CPSF1Q10570 1443 aaKnown RBP10.74□□□□□ -0.69
CLN8-201ENST00000331222 GUCY1B2O75343 617 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 ETS1P14921 441 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 PIK3R1P27986 724 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 ITPKBP27987 946 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 SSTR1P30872 391 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 PKNOX1P55347 436 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 GIT2Q14161 759 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 ZIK1Q3SY52 487 aaPredicted RBP10.73□□□□□ -0.69
CLN8-201ENST00000331222 TTC7BQ86TV6 843 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 STK32CQ86UX6 486 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 SLC4A9Q96Q91 983 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 ZSWIM1Q9BR11 485 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 CDADC1Q9BWV3 514 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 TMEM138Q9NPI0 162 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 DRG1Q9Y295 367 aaKnown RBP10.73□□□□□ -0.69
CLN8-201ENST00000331222 MRPS23Q9Y3D9 190 aaKnown RBP10.73□□□□□ -0.69
CLN8-201ENST00000331222 PCCBP05166 539 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 LSM3P62310 102 aaKnown RBP10.73□□□□□ -0.69
CLN8-201ENST00000331222 PTPN11Q06124 597 aaPredicted RBP10.73□□□□□ -0.69
CLN8-201ENST00000331222 MCOLN3Q8TDD5 553 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 ACOT9Q9Y305 439 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 RPS12P25398 132 aaKnown RBP10.73□□□□□ -0.69
CLN8-201ENST00000331222 PSEN2P49810 448 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 MAXP61244 160 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 COPZ1P61923 177 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 CRY1Q16526 586 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 PCNX4Q63HM2 1172 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 MAB21L3Q8N8X9 362 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 SMYD1Q8NB12 490 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 OMA1Q96E52 524 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 OXCT2Q9BYC2 517 aaPredicted RBP10.73□□□□□ -0.69
CLN8-201ENST00000331222 CDC42EP4Q9H3Q1 356 aaKnown RBP10.73□□□□□ -0.69
CLN8-201ENST00000331222 PHGDHO43175 533 aaKnown RBP10.73□□□□□ -0.69
CLN8-201ENST00000331222 CCZ1BP86790 482 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 CCZ1P86791 482 aaPredicted RBP10.73□□□□□ -0.69
CLN8-201ENST00000331222 SBK1Q52WX2 424 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 SLC30A9Q6PML9 568 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 ULK2Q8IYT8 1036 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 COPS5Q92905 334 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 UBA2Q9UBT2 640 aaPredicted RBP10.73□□□□□ -0.69
CLN8-201ENST00000331222 PACSIN3Q9UKS6 424 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 MCIDASD6RGH6 385 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 ZMPSTE24O75844 475 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 EPN2O95208 641 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 MAPK7Q13164 816 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 PGM5Q15124 567 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 ZBTB46Q86UZ6 589 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 FAM129CQ86XR2 697 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 NOL6Q9H6R4 1146 aaKnown RBP10.73□□□□□ -0.69
CLN8-201ENST00000331222 KANSL3Q9P2N6 904 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 NDRG2Q9UN36 371 aaKnown RBP10.73□□□□□ -0.69
CLN8-201ENST00000331222 MYH6P13533 1939 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 HMGCRP04035 888 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 CCND1P24385 295 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 CD151P48509 253 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 VPS72Q15906 364 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 KBTBD12Q3ZCT8 623 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 ARHGEF19Q8IW93 802 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 SETD6Q8TBK2 473 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 CDK5RAP1Q96SZ6 601 aaKnown RBP10.73□□□□□ -0.69
CLN8-201ENST00000331222 PRKD2Q9BZL6 878 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 ALG9Q9H6U8 611 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 FBXO6Q9NRD1 293 aaPredicted RBP10.73□□□□□ -0.69
CLN8-201ENST00000331222 NDUFAF1Q9Y375 327 aa10.73□□□□□ -0.69
CLN8-201ENST00000331222 MFN2O95140 757 aa10.72□□□□□ -0.69
CLN8-201ENST00000331222 ATP5BP06576 529 aaKnown RBP10.72□□□□□ -0.69
CLN8-201ENST00000331222 RPA3P35244 121 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms